Gene Information

Name : TMO_c0056 (TMO_c0056)
Accession : YP_006373648.1
Strain :
Genome accession: NC_017958
Putative virulence/resistance : Unknown
Product : lytic transglycosylase, catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 56866 - 57435 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCCTGCGCGCACTGGTGCTCACTGCCGGCCTGTATGCCGTTGCCGCCCTGGCCCAGGAGGTTCCGCCACCGGCTTA
CCAGCTTGCCGCCCAGCGCGCAGGCATCCCCTCGACCGTGCTCTACGCCGTGGCCTTGCAGGAGAGCGGCATCCGGCGCA
ACGGGCGCCTGGTGCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAGTCGCGCCGCTTCGCCACGCGCGCCGACGCCTGC
GCTGGCCTGCAGCAGGCGATGCGCGCCACGCCGCACACGCGCATTGATGCGGGCCTGGGCCAGATCAACCTCGGCTACCA
CAAGCACCGCTTTACCGGCGCGTGCGACCTGCTGGATCCGTATCGCAACCTGGCCGTTGCCGCCGAGATCCTGAAGGAGC
AGCACACCCCCGGCGAGGACTGGCTGCTGGCGATCGGCCGCTACCACCGCCCCGCAGGCGGCGAGCCCGCCGCCCGCTAT
CGGCGCAGCGTGTCGCGCCACCTTGCCCGCGTGCAGGGCACGCGACCAGCCGCCGCGGTCCTCGCGGCGCGCCAGGAGAC
CTCCCCATGA

Protein sequence : 
MPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRLVPWPWSLNVAGQSRRFATRADAC
AGLQQAMRATPHTRIDAGLGQINLGYHKHRFTGACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAGGEPAARY
RRSVSRHLARVQGTRPAAAVLAARQETSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-84 100
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-57 75
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 3e-44 57
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 2e-32 52
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-35 51
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-33 49
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 1e-25 44
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 7e-23 43
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 7e-23 43