Gene Information

Name : TMO_c0037 (TMO_c0037)
Accession : YP_006373629.1
Strain :
Genome accession: NC_017958
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 38170 - 41061 bp
Length : 2892 bp
Strand : -
Note : -

DNA sequence :
ATGCGGTGGAAACTTCCATGGCCGAAGCTGGCTGCCGTCAGCGCCGAAGACACCGCCGCCGACGAGCAGCCGGACGGCTG
GCAGCGCCACGTCGAGGCCTTGCAGCAAGCCGGCATCCCCGAACCCGGCGCCGCGGTCCAGGGCCGCAAGCCGGCGACCG
TGGCCGACGAGCAGGCGCTGTACGACGTCGCACCGTCCTTCGTGGAACTGCTGCCCTGGGTGGAGTTCTTGCCCGAGTCG
AAATCGATGCTCCTGGAGGACGGCCAATCGGTGGCCGCCTTCTACGAGCTGGTGCCGCTGGGCACCGAAGGCCGGGAACC
CGGCTGGCTCGCGCATGCCCGCGACGCCCTGGAAAACGCGCTTCAGGACAGCTTCGATGAACTGGACGAGAACCCGTGGG
TGCTCCAGCTCTATGCCCAGGACGAACCGAGCTTCGACCAGTACATGCAGACCTTGCGCGATTACGTGCAGCCACGTGCG
CGCGGCTCGGCGTTCACCGAGTTCTACCTGCGCTTCTTCGGCCACCACCTGCGCGCTGTGGCCAAGCCCGGCGGCCTGTT
CGAGGACACGGTGGTCACGCGGCTGCGCTGGCGCGGCCAGACGCGGCGCGTGCGCATGGTGGTGTACCGCCGCGCGAGCG
GACAGGGACAGGCAAACCGCCGCGGCCAGACACCCGAGCAGATGCTGGGCATCGTCTGCGACCGCCTGTGCGGCGGCCTG
GCGAACGCCGGCATCCAGGCCCGGCGCATGGTCGCGGCCGACGTCCACGACTGGCTGCTGCGGTGGTTCAACCCGCGCCC
CACGCTGCTCGGGCCTGGGGTGGAGGACCGGGAGCGCTTCTACGCGTTGGCGCGCTATCCGGACAGTACCGAGGAAAGCG
AGGCCGGCGAGATCGAGCTGGCGAGCGGGCGGGATTTCAGCCAGCGGCTGTTCTTTGGGCAGCCGCGCTCGGACGTGGCG
CAAGGGGCCTGGTACTTCGACGGCATGCCGCACCGCGTGCTGATCACCGACCGGCTGCGCATGCCGCCCGGCACCGGGCA
CCTGACCGGCGAGACCCGCAAGGGGGACGCGATCAACACGCTGTTCGACCAGATGCCCGAGGACACCTTGATGTGTCTCA
CCATGGTGGCCACGCCGCAGGACGTCCTCGAATCGGACCTCAACCATCTGGCGAAGAAAGCTGTGGGCGAGACGCTGGCG
TCGGAGCAGACGCTCAAGGACGTGCATGAAGCCCGCTCCCTGATCGGCAGCGCGCACAAGCTCTACCGGGGCACTCTGGC
GTTCTACCTACGCGGGCGCGACGAGGCGGAACTGGATCGGCGCGGCCTGGACCTCGCGAACGTGATGCTCAACGCCGGCC
TGCAGCCGGTGCGCGAGGACGACGAGGTGGCGCCGCTCAACAGCTACCTGCGCTGGCTGCCGTGCTGCTACAACCCCGGC
AAGGACCGGCGCCGGTGGTACACGCAACTGATGTTCGCCCAGCACGCGGCGAACCTGTCGCCAGTATGGGGCCGCGCCCA
GGGCACGGGGCATCCCGGCATCACGATGTTCAATCGCGGCGGCGGCCCGATTACGTTCGACCCCTTGAACAGGTTGGATC
GGCAGATGAATGCCCATCTGTTTCTATTTGGCCCCACCGGCTCGGGGAAGTCCGCCACGCTCAACAACCTGCTGAACCAG
GTGACGGCCATCTACCGGCCGCGGCTTTTCATCGTGGAAGCCGGCAACAGCTTCGGCCTGTTCAGCGACTTCGCCAGGCG
CCTGGGCCTGACCGTGAACCGGGTCAAGCTGGCCCCCGGATCGGGCATCAGCCTGGCGCCGTTCGCCGACGCACGCCGGC
TGATCGAAACGCCCAGCGACGTACAGACGCTCGATGCCGACGCGCTGGACGAAGACCTGCCCCCCGATGCCTCGGCCATG
GAAGCGGACGAGCAGCGCGACGTGCTGGGCGAACTGGAGATCACAGCGCGGCTGATGATCACGGGCGGCGAAGACAAGGA
AGAAGCGCGGATGACGCGGGCCGACCGCTCGCTGATCCGCCAGTGCATCCTCGACGCCGCCGAACATTGCGTGGCCGAAA
AGCGCACCGTGCTCACGCGCGACGTGCGCAACGCGCTGCGCGCCCGTGGCCAGGACCCGACGCTGCCCGAGATGCGGCGC
GTGCGGCTGCTGGAGATGGCGGACGCGATGGACATGTTCTGCCAAGGCACGGACGGCGAGATGTTCGACCGTGACGGCAC
GCCGTGGCCCGAGGCCGACATCACGCTGGTCGATCTGGCGACCTATGCCCGCGAGGGCTACAACGCGCAGCTCTCCATCG
CCTACATCAGCCTGATCAGCACGGTGAACAACATCGCCGAGCGCGACCAGTACCTGGGCCGGCCGATCGTCAACGTGACC
GACGAAGGTCACATCATCACCAAGAACCCGCTGCTCGCGCCCTATGTCGTGAAAATTACAAAAATGTGGCGCAAGTTGGG
CGCCTGGTTCTGGCTGGCGACGCAAAACATCGACGATCTGCCGCGCGCCGCAGAGCCCATGCTCAACATGATCGAGTGGT
GGGTGTGCCTGTCGATGCCGCCGGACGAAGTGGAGAAGATCGCCAGGTTCCGCGAACTCTCGCCGGCGCAGAAGGCGCTG
ATGCTCTCCGCACGCAAGGAAGCGGGCAAGTTCACCGAGGGCGTCATCCTCTCCAAGAGCATGGAAGTGCTGTTCCGCGC
CGTGCCGCCAAGTCTCTACCTCGCGCTCGCGCAAACCGAGCCCGAGGAGAAGGCAGAACGCTACCAGCTCATGCAGCAGC
ACGGCGTCAGCGAGCTGGATGCCGCCTTCAAGGTGGCTGAGAAGATCGACCGGGCACGTGGCATCGAGTCGCCGACCCTG
GACCTGCCCTGA

Protein sequence :
MRWKLPWPKLAAVSAEDTAADEQPDGWQRHVEALQQAGIPEPGAAVQGRKPATVADEQALYDVAPSFVELLPWVEFLPES
KSMLLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRA
RGSAFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVVYRRASGQGQANRRGQTPEQMLGIVCDRLCGGL
ANAGIQARRMVAADVHDWLLRWFNPRPTLLGPGVEDRERFYALARYPDSTEESEAGEIELASGRDFSQRLFFGQPRSDVA
QGAWYFDGMPHRVLITDRLRMPPGTGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLESDLNHLAKKAVGETLA
SEQTLKDVHEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPG
KDRRRWYTQLMFAQHAANLSPVWGRAQGTGHPGITMFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQ
VTAIYRPRLFIVEAGNSFGLFSDFARRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDASAM
EADEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRARGQDPTLPEMRR
VRLLEMADAMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIVNVT
DEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWVCLSMPPDEVEKIARFRELSPAQKAL
MLSARKEAGKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQHGVSELDAAFKVAEKIDRARGIESPTL
DLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 99
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 80
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 67
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 63
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 62
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 62
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 53
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 53
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 52
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 51
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49