Gene Information

Name : TMO_c0032 (TMO_c0032)
Accession : YP_006373624.1
Strain :
Genome accession: NC_017958
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33746 - 35140 bp
Length : 1395 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGTCCTGAATCGATGAACCTTTCCGCCAAGGCGTGCCGCCTGCTGCGCCCGAAGGCGCTGGCCGGCCCGCTCGC
TCTGGTCTGCGGCCTGGCGTGGGCGCAGGTCGGATACCAGAACAGCGGCCCCGTCCTCGGCGATGACGTCATGTACTCGA
TCGGCGGTGGCAGTGCGGTGTCCATGGGCCGCGCGGCCGGCATGCGCTCCATCGGGGTCGGCGTGGGGTGGAACAGCAAC
CTGATCTGCGGCGACATGAGCATCCAGACCACGCTGCGCAATCAGCTCAACGGCATCACGAACGGCTTTCAGCAGATCAT
GAGCAACGTGATCCAGAGCGCGACCAGCGCGGTTGCATCGCTGCCGGCGCTGATCATTCAGCGCGCCGATCCGGGCCTGT
ACAACCTGCTGACCAACGGCGTGCTGCAGGCGCGGCTGGACTTCGACCGCTCCAAGCTGACGTGCCGCGCCATGGCGGAG
AAGATGGCCGAGACTGCGGGTGGCCAGCTTGGCTGGAGCCAGATGGCCGAAGGCATGGCCTTGCGTGACGCGGTTGGCAG
CAACGATGCCGTGTCGGCCGTCGAGCAGGCCGAGACGCGCCGCGGCAACGACGGCCTTCCCTGGGTGGGCGGCAGCAATG
CCGGTGGCGCAGGCCAGTCCGCCATCCGCGTGGTCGGCGACGTCACCCGCGCGGGCTACAACCTGGTCAACGGGCGCGGC
GTGACGGACACATCCTCCATCGCGTCCACCAGTTGCGCGAGCCTGTCCTGCCAGACCTGGACGTCGCCGCAGCAGGCGAC
CGAATGGGCCACCCGGGTCCTCGGGGAACAGGTGCAGCGCACGTGCGATTCCTGCACCAAGACCGAGACGGTGCCCGGCG
TCGGGCTGACGCCGCTGATCCAGGAGGAGTACGAAGCCAAGCTGGAAGTCTTGCAGGAACTGGTTTCCGGCGTGCGCAAC
ACCACCTTCGAGAACTTGCGCGAGGCCGGCAGCACGTCGCTGCCGATCACGCGCGGCGTCATCGAGGCGCTGCGCGACGA
GCCGGACCAGGACCTGCTGGCGCGGCGCCTCGCGTCCGAGGTGGCGCTTTCGTCGGTGCTGGAGAAGGCACTGCTGCTCC
AGCGCACGCTGCTCACCGGCAAGAAAGAGCCCAACGTGGCAGCCAACGAGTTGGCAGTCGAGGCCGTGAACCACGAGAGC
GACACGCTCGACCGGGAGATCCGCAACCTCAAGACCGAACTTGAACTGCGGCGCGAGCTGGCGAACAACTCGCCGATGGC
CATCATCCAGCGCCATGGCACGCGCGCGGCAGGCTCGCGCGGCATCTATGAGGGCGATCCGGTGCCCGACCGCCTCGACC
AGTTGCAGAAGGGCAATCCGGGAGGCCGGCCATGA

Protein sequence :
MKRPESMNLSAKACRLLRPKALAGPLALVCGLAWAQVGYQNSGPVLGDDVMYSIGGGSAVSMGRAAGMRSIGVGVGWNSN
LICGDMSIQTTLRNQLNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAE
KMAETAGGQLGWSQMAEGMALRDAVGSNDAVSAVEQAETRRGNDGLPWVGGSNAGGAGQSAIRVVGDVTRAGYNLVNGRG
VTDTSSIASTSCASLSCQTWTSPQQATEWATRVLGEQVQRTCDSCTKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRN
TTFENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKKEPNVAANELAVEAVNHES
DTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPVPDRLDQLQKGNPGGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 98
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-138 75
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 2e-121 65
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-113 64
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 3e-111 64
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 4e-113 63
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 3e-63 42
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 1e-65 41
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 1e-65 41
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-63 41
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 1e-63 41
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 8e-64 41