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Name : istA (TMO_c0001) Accession : YP_006373593.1 Strain : Genome accession: NC_017958 Putative virulence/resistance : Unknown Product : Integrase, catalytic region Function : - COG functional category : - COG ID : - EC number : - Position : 1 - 1509 bp Length : 1509 bp Strand : + Note : - DNA sequence : GTGATCACCATGGTCATGTTGGCCAAGATCCGGCGGATGCATTTCCGCGATGGCCTGCCGCTGCGCGAGATCGCCAAGCG CACGGGCCTATCCCGCAATACCATCCGGCGATGGCTGCGCAGCGGCCAGTCCGAGCCGGTCTATCCCAGGCGAGCCTCGC CCTCCCGGCTCGATCCCTACCGGTCCCAGTTGGAGACGTGGCTGCGTGCCGACAGCCATCGTCCCCGGCGGGAACAACGC ACCGCCAAGGTGCTGTTCTCGCAGTTGCAGGCGATCGGCTATCCGGGCACCTACACCCGGGTGACGGCCTTCATCCGCCA GTGGAAGGCGGCCGGCGGCGCCAGCCGCCGCCCGGCCTTCGTGCCGTTGCACTTTCCTCCGGGTGAAGCCTTCCAGTTCG ACTGGAGCCGCGAGTACGCCTTCGTCGGCAGCCACGCCAAGATGCCGCTGGATCTCGCCCACGTGAAGCTGGCCTGCAGC CGCGCCTTCTGGTTGGTGGCCTATCCCACCCAGAGCCACGAGATGCTGTTCGATGCTCATACCCAGGCGTTTACCGCCTT CGGTGGCGTGCCGCGCCGCGGCATCTACGACAACATGAAGACGGCGGTGGACGGGATCGGCCAGCACCGGGAACGGCGGG TCAACGCCCGCTTCCACGCCATGACCAGCCACTACCTGTTCGCCGCGGAGTTCTGCAACCGCGCCGCGGGTTGGGAGAAG GGGCGGGTCGAGAAGAACGTGCAGGACCGGCGCCGACAGATCTGGATCGAGGCCGGGGCCCGCCACTGGCCAGATCTGGA CACCCTCAATGCCTGGCTCGCCAGCGAGTGCCGCGCCGCTTGGCCGATGCAGGCGCATCCGGATGCCTCCGACATCACCG TGGCCGAAGCTCTGGAGGACGAACAGCCCCACCTGATGCCGATGCCCGCGCCCTTCGACGGCTACATCGAGCGGCCGGTG CGGGTCAGTTCGACCGCGCTGGTCAGCTTCCAGCGCAACCGCTACAGCGTGCCGTGCGAACACGCCCACGCCGTCGCCAG CCTGCGCGTGTATCCCTTCGAACTGGCCGTGGTGGTCGGCGAGGCCGAGGTCGCCCGCCACCGGCGCAGCTTCGAGCGTG ATCGGGTCCACTACGACTGGCAGCACTACATCGCCCTGGTCCAGCGCAAGCCGGGGGCACTGCGTGACGGCGCGCCGTTC CTGTCCATGCCCGATCCGCTGCGCAAGCTGCAGCAGGTGTTGCTGCGCCAGCCTCACGGCGACCGCGCCATGGCCCAGGT GCTGGCCGCCGTACCCGTGCACGGGCTCGAAGCGGTACTGGTGGCGGTGGAACTGGCACTCGAGTCCGGCCTGGTGCGCG CCGACCACGTGCTCAACGTGCTGGGGCGATTGCAGCATCCGGACCGCACGATCGAGACGGTCGCCTCGCGAGTGACGCTG CGTCATCCGCCGGTGTCCGATCCGGCCCGCTACGACGCCCTGCGGGAGGCAGATCATGTCGACGCCTGA Protein sequence : MITMVMLAKIRRMHFRDGLPLREIAKRTGLSRNTIRRWLRSGQSEPVYPRRASPSRLDPYRSQLETWLRADSHRPRREQR TAKVLFSQLQAIGYPGTYTRVTAFIRQWKAAGGASRRPAFVPLHFPPGEAFQFDWSREYAFVGSHAKMPLDLAHVKLACS RAFWLVAYPTQSHEMLFDAHTQAFTAFGGVPRRGIYDNMKTAVDGIGQHRERRVNARFHAMTSHYLFAAEFCNRAAGWEK GRVEKNVQDRRRQIWIEAGARHWPDLDTLNAWLASECRAAWPMQAHPDASDITVAEALEDEQPHLMPMPAPFDGYIERPV RVSSTALVSFQRNRYSVPCEHAHAVASLRVYPFELAVVVGEAEVARHRRSFERDRVHYDWQHYIALVQRKPGALRDGAPF LSMPDPLRKLQQVLLRQPHGDRAMAQVLAAVPVHGLEAVLVAVELALESGLVRADHVLNVLGRLQHPDRTIETVASRVTL RHPPVSDPARYDALREADHVDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-128 | 56 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-108 | 48 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-86 | 44 |
