Gene Information

Name : kdpB (TMO_0449)
Accession : YP_006369872.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Unknown
Product : potassium-translocating P-type ATPase B subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 498519 - 500567 bp
Length : 2049 bp
Strand : +
Note : -

DNA sequence :
ATGCGTACATCCGAGGACATCCGCCTCGTCGACCCGGCGCTGCTGTCGCGCGCCGCCCGCGAGGCCTTCACCAAGCTCGC
GCCCCACGCCCTTGCCGGCAATCCGGTGATGCTGACCACCGCCGTGGTCGCAGCCGTCGCGACCATCCTGGCCGTGATCG
ATCTTGCAAGCGGCGGCCCCCATGGTGCGGTGCTGGCGCAGATCTGCCTCTGGCTTTGGGCGACGGTGCTGTTCGGCAAT
TTTGCGGAAGCCCTGGCCGAGGGCCGCGGCCGGGCCCGCGCCGACAGCCTGCGCGCCACCCAGTCCGAGACGCCGGCAAA
GCTGCTGCCGGCCATGCCGCGCGGCGATGTCCGGATCCATGACTGGCGCGAGGTCTCGTCCCGCGATCTGGGGCCCGATG
ACCTGGTCTATGTTGAGGCGGGCGACATCGTGCCTGCCGATGGCGAGGTCGTCGCCGGCATCGCCTCGGTCGACGAAAGC
GCCATCACCGGCGAAAGCGCGCCGGTGATCCGCGAAAGCGGCGGCGACCGCTCGGCGGTCACCGGCGGCACCCGGGTGGT
ATCGGATGCGATCGTGGTCCGCGTCACCCAGCGGCCGGGCGAAAGCTTCCTCGACCGGATGATCGGTCTGGTCGAGGGCG
CGACGCGGCGCAAGACGCCGAACGAGATCGCGCTGACCATCCTGCTGGTCTCGCTGACGCTGATCTTCCTGATCGTGGTG
GCCAGCCTCGAAGCCTTCGCCGCCTTCTCGGGCACGCTGATCCCGGTCGGCTTCCTGATCGCGCTGCTGGTCACCCTCAT
CCCCACCACCATCGGCGGCCTGCTCTCGGCCATCGGCATCGCCGGCATGGACCGGCTGATCCGCGCCGGCGTCGTGGCCC
GGTCGGGCCGTGCGGTCGAGGCGGCGGGCGATGTCGACGTGCTCCTGCTGGACAAGACCGGCACCATCACCTTCGGCAAC
CGCATGGCCGATGCCTTCCTGCCCCTGCCCGGCGTGGGGGAGGCGCGGCTGGCAGAGGTTGCGGCGCTCGCCAGCCTTGG
CGACGAAACGCCCGAGGGCCGCTCGATCCTCGATCTGGCGCGCAAGGCCCATGGTTTCCGTGCCGAGGCGGCGGAGGTCG
CGCGCATGGTGCCCTTCACCGCCCAGACCCGGATTTCCGGCGCCGACCTCAACGATGGCCGCCGCCTGCGCAAGGGCGCG
GGCGATGCGATCCTGAAGCAGGCCAGGGGCAGCGTCCCGCCCCAGCTCGGCCATCTGGTCGATCAGGTCGCGCGCAGCGG
CGGCACGCCACTGGTGGTGGCGGAAGACGACCGGCCGCTGGGTGTCATCCACCTGAAGGACGTGATCAAGCCCGGCATCC
GCGAGCGCTTTTCGGAACTGCGGCGGATGGGCATCCGCACGGTGATGATCACCGGCGACAACCCGATCACGGCGGCCGCC
ATCGCGGCGGAAGCCGGTGTCGATGACGTGCTCGCCGAGGCGACCCCCGAACGCAAGCTGGAACTGATCCGGGCTGAACA
GGCCAAGGGCCGGATGGTCGCCATGTGCGGCGACGGCTCAAATGATGCGCCGGCGCTGGCCCAGGCCGATGTCGGTGTGG
CGATGAACGAGGGCACGCCGGCTGCCAAGGAGGCCGCCAATCTGATCGATCTCGACAGCGATCCCACCAAGCTCATCGAA
GTCGTGATGGTCGGCAAGCAGCTGCTGGTCAGCCGCGGGGCCCTCACCACATTCTCGATCGCCAATGACGTGGCGAAGTA
TTTCGCGATCGTGCCGGCGCTGTTCGCGAGCGTCTATCCGGCGCTGGGTGCGCTCGACATCATGCAGCTTTCAAGCCCTG
AAAGCGCGATCCTCTCGGCGGTCATCTTCAACGCCCTGATCATCGTGGCGCTGGTGCCGCTGGCGCTCAAAGGCGTGGCG
GCACGGGCAACCTCGGCCGCGGCGCTGCTGCGCCGGAACCTGCTGATCTATGGCCTCGGCGGCCTGATCGCACCCTTCAT
CGGCATCAAGGCGATCGACATGGTCGTCTCGGGCCTGGGCCTGGTCTGA

Protein sequence :
MRTSEDIRLVDPALLSRAAREAFTKLAPHALAGNPVMLTTAVVAAVATILAVIDLASGGPHGAVLAQICLWLWATVLFGN
FAEALAEGRGRARADSLRATQSETPAKLLPAMPRGDVRIHDWREVSSRDLGPDDLVYVEAGDIVPADGEVVAGIASVDES
AITGESAPVIRESGGDRSAVTGGTRVVSDAIVVRVTQRPGESFLDRMIGLVEGATRRKTPNEIALTILLVSLTLIFLIVV
ASLEAFAAFSGTLIPVGFLIALLVTLIPTTIGGLLSAIGIAGMDRLIRAGVVARSGRAVEAAGDVDVLLLDKTGTITFGN
RMADAFLPLPGVGEARLAEVAALASLGDETPEGRSILDLARKAHGFRAEAAEVARMVPFTAQTRISGADLNDGRRLRKGA
GDAILKQARGSVPPQLGHLVDQVARSGGTPLVVAEDDRPLGVIHLKDVIKPGIRERFSELRRMGIRTVMITGDNPITAAA
IAAEAGVDDVLAEATPERKLELIRAEQAKGRMVAMCGDGSNDAPALAQADVGVAMNEGTPAAKEAANLIDLDSDPTKLIE
VVMVGKQLLVSRGALTTFSIANDVAKYFAIVPALFASVYPALGALDIMQLSSPESAILSAVIFNALIIVALVPLALKGVA
ARATSAAALLRRNLLIYGLGGLIAPFIGIKAIDMVVSGLGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 7e-145 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 5e-145 61
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-126 59
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-126 59
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-126 59
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-126 59
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-126 59
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-126 59