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Name : ygaD (TMO_3277) Accession : YP_006372699.1 Strain : Tistrella mobilis KA081020-065 Genome accession: NC_017956 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : - COG ID : - EC number : - Position : 3607006 - 3608760 bp Length : 1755 bp Strand : - Note : - DNA sequence : ATGAGCGACAGCGCAGCCTCATCGGGCGGTGTATCCCCGTTTCATCGCACGTTCACCCGCCTGTTCAGGGCCATGGGCCC TCACGCCCCGGCGCTGCGCCGGGCATTGGCGGAACTCGCAGCGGCCGCCGCTCTGCAGGGGGCGGCACTGGCCTTGCTCG CCCCGCTGCTGACGGCGGCGCTTGGGGGTGATCCGCAGGCTGCGCTGCCCTGGTTCGCCGGGGTCTGCGGCCTTGCGGCG GCGGCGGCAGTGCTGCGCTGGCGGGCCCAGGGCTTCGACTATGGCGGCGACATGGCGCGAGCGACCCACGAGCTCAGAAC CCGGCTGGGAGCCCAGCTGAGGCGGATGCCGCTCGAACGCCTTCAGGACCGGCGGACCGGCGAGATCAGTGCGGCCCTGC TCGGGAATGTCGACGAGACCCTGCACTACGTGCTGACGGTGGCCAATCTTCTGCTTCAGGCGCTGGTGACGCCGCTGGTT GCGGCGGCGGGGCTGGTTTTTGTGGACTGGCCGGTTGCGGCGGCGCTGGCTGCGGTTTTCCCGCTGATCCTGTGGCTGAC TCGCTGGCGGCGGCCCCGGCAGGGCGAACAGATGCGCCGCCTGGCCGAAGCCCATGCCCGAAGCGCTTCCGACATCACCG AATACCTTCAGGGGCTGGCCGTCCTGAAGTCGGCGGGCTGCGCCGGGGAACGGGCCGCGGCGCTAGACCGGAGCCTGACG GCACTGGAGGCGGTGCAGGTCGAGGATCACCGCCGGGCGGCAGGGCCAAATCTGACGGTGGCGAGTGCAACAGAACTCGC TCTGCTCGCGGTAGCCGGCTTCGGACTCTGGCGGGTGACGGCCGGTCTGCTCGATCCTGCGGCGCTTGCGGCGGTGCTGG TGGTGACGGTGCGCTTTGCCGAACCGCTCGCCACCGTCACCGCCTATACGGTGGTGATCGATCTGATCGAGGCGGCGCTC GACCGGATCGACGCGCTGATGGCCGTTCCGCCTCTGCCGGTCGCGATGAAGCCACGGCAGCCGGAGCATTTCGACATTGC CTTCGAGGATGTCACCTTCAGCTATGCGGCGGCGAAGGGGCCGGCGCTGCGCAGGGTGTCGGCCCGCCTGCCCGAACGCA GCCTGACGGCTCTGGTCGGTCCCTCGGGCTCGGGCAAGACCAGCTTTGCCCGGCTGATCCAGCGTCATGCCGATCCGGCA GAGGGGCGGGTGACGATCGGCGGCGTCGACCTGCGGGACATCGCGCCCGACCGGCTGGACCGGCTGGTGTCCGTGGTCTT CCAGACCGTGCACCTGTTCGACGATACCGTGCTGGCCAACATTCGCATCGGCCGGCCCGAGGCGGATGACGCGGCGGTGA TGACAGCGGCACGGGCGGCGCTCTGCGACGGTTTCGTGAGCCGCCTGCCCGAGGGCTGGCAGACCTGTCTTGGCGAGGGC GGTGCACGGCTTTCAGGGGGGGAGCGCCAGCGAATCGCCATCGCCCGGGCGCTGCTGAAGGACGCGCCGATCGTGATCCT GGACGAGCCGACGGCCGCGCTCGATACCGAAAGTGAGGTCGCGGTACAGGTGGCGATCGATGCCCTGGTCCGCGACCGCA CGGTGATCGTCATTGCCCACCGCCTGTCGACGGTGCGGGGAGCCGACCGCATCCTGGTACTGGAGGCGGGCTGCGTGGTC CAGGAGGGGCGCCACGACGATCTGGTCGCCGTGTCCGGCCGCTATCGCGCCCTCTGGACGGCTCTCACCGGCTGA Protein sequence : MSDSAASSGGVSPFHRTFTRLFRAMGPHAPALRRALAELAAAAALQGAALALLAPLLTAALGGDPQAALPWFAGVCGLAA AAAVLRWRAQGFDYGGDMARATHELRTRLGAQLRRMPLERLQDRRTGEISAALLGNVDETLHYVLTVANLLLQALVTPLV AAAGLVFVDWPVAAALAAVFPLILWLTRWRRPRQGEQMRRLAEAHARSASDITEYLQGLAVLKSAGCAGERAAALDRSLT ALEAVQVEDHRRAAGPNLTVASATELALLAVAGFGLWRVTAGLLDPAALAAVLVVTVRFAEPLATVTAYTVVIDLIEAAL DRIDALMAVPPLPVAMKPRQPEHFDIAFEDVTFSYAAAKGPALRRVSARLPERSLTALVGPSGSGKTSFARLIQRHADPA EGRVTIGGVDLRDIAPDRLDRLVSVVFQTVHLFDDTVLANIRIGRPEADDAAVMTAARAALCDGFVSRLPEGWQTCLGEG GARLSGGERQRIAIARALLKDAPIVILDEPTAALDTESEVAVQVAIDALVRDRTVIVIAHRLSTVRGADRILVLEAGCVV QEGRHDDLVAVSGRYRALWTALTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp7 | YP_002346905.1 | ABC transporter permease | Not tested | HPI | Protein | 1e-118 | 54 |
| ybtQ | NP_669703.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-118 | 54 |
| ybtQ | NP_993010.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-118 | 54 |
| ybtQ | YP_070127.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-118 | 54 |
| ybtQ | CAA21387.1 | - | Virulence | HPI | Protein | 1e-118 | 54 |
| APECO1_1055 | YP_853072.1 | ABC transporter | Not tested | PAI IV APEC-O1 | Protein | 5e-119 | 54 |
| irp7 | CAB46572.1 | inner membrane ABC-transporter, Irp7 | Virulence | HPI | Protein | 5e-118 | 53 |
| irp7 | YP_001006812.1 | inner membrane ABC-transporter YbtQ | Not tested | HPI | Protein | 7e-118 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ygaD | YP_006372699.1 | ABC transporter ATP-binding protein/permease | BAC0433 | Protein | 5e-119 | 54 |
