Gene Information

Name : ybbA (TMO_3197)
Accession : YP_006372619.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3523072 - 3523761 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGATCCGGCTGCAACAGGTGTCGGTGTCGTTCGGCCGCGGATCCGCCGCGGTCGACGTGCTGAAATCGGTCGATCTCGA
TCTCGAAGCCGGGCGCACGCTGGCGGTGCTGGGGCCCTCGGGCGCGGGCAAGTCGACACTGCTCGCGATCGTTGCGGGGC
TGGAGCGGGCGAGCGCCGGCCGGGTGGAGATCGCGGGCCAGGATCTGGGCCGGCTCGACGAGGATGGCCTGGCCCGGCTC
CGCGCCCGACATATCGGGATCGTCTTCCAGGCTTTCCACCTGATTCCGACGCTGACCGCGCGCGAGAACGTCGCCCTGCC
GCTGGAACTGGCCGGGGCGGTCGATGCCGACGACCGCGCCCGGGCGGCGCTGGAACAGGTGGGGCTGGGGCCTCGTCTCG
ATCATTATCCGGCAGCCCTGTCGGGGGGTGAACAGCAGCGGGTGGCCTTTGCCCGGGCGGTGGTGCATCGCCCGTCGCTG
CTGCTCGCCGACGAGCCGACCGGCAATCTGGACCGGGCCACGGCGCGGCTGATTTCCGATGCGCTGTTCGGCTATCGCGA
CGAGACCGGGGCCGCGGTCATGGTCATCACCCATGACGAGGCGCTTGCCCGCCGCGCCGACCGGGTGGTGCGGATCGAAG
ACGGCCGCCTGTCCGAAGCGGCGGGGCTTCCGGCCGAGGTTCGGCCATGA

Protein sequence : 
MIRLQQVSVSFGRGSAAVDVLKSVDLDLEAGRTLAVLGPSGAGKSTLLAIVAGLERASAGRVEIAGQDLGRLDEDGLARL
RARHIGIVFQAFHLIPTLTARENVALPLELAGAVDADDRARAALEQVGLGPRLDHYPAALSGGEQQRVAFARAVVHRPSL
LLADEPTGNLDRATARLISDALFGYRDETGAAVMVITHDEALARRADRVVRIEDGRLSEAAGLPAEVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-24 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_006372619.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_006372619.1 ABC transporter VFG2059 Protein 7e-17 46