Gene Information

Name : gsiA (TMO_2850)
Accession : YP_006372272.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Unknown
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3157489 - 3159156 bp
Length : 1668 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGGCGCGCTGCTCTCGATCGAGGGCCTGACCATCCCGCTGCCCGAAGGGGCTGACCGCCCGCATGCGATCGAGGA
CGTGTCCTTCGACATCGGCCGCGGCGAGATCGTCTGCATCGTGGGCGAAAGCGGTTCCGGCAAGTCGATGTCGGCCAGCG
CCGTGATGGGTCTGCTGCCCGAAGGTCTGACGCCCTCGGCCGGCCGGGTGGTCTTCGGCGGGCGCGATCTGCTGGGCCTT
CCCGCCGCCGAACGCCGGCGGCTGCGCGGTGGCAAGGCCGCGATGATCTTCCAGGAGCCGATGACCGCGCTCAACCCGGT
GATGACGGTCGGCGACCAGATCGCCGAGGCGCTGGTCGCCCACGGCATGCGCGACCGCGCCGCGATCCGCCGCCGGGTGA
TCGAGTTGCTGACCCGGGTCGATCTGCCGGACCCTGAGAAGATCGTGAAGAGCCACCCCTTCCGGCTCTCGGGCGGGCAG
CGCCAGCGGGTGATGATCGCGATCGCACTTGCCAACGAACCCGACCTGCTGATCGCCGACGAACCGACCACGGCGCTCGA
CGTCACCACCCAGGCCCAGATCCTGGAGCTGATCCGCGAGATCCAGGCCCGCACCGGCATGGGGGTCATGTTCATCACCC
ATGATTTCGGCGTGGTGGCCGAAATCGCCCATCGGGTGGTGGTGATGTGTGCGGGCCGCGTGGTCGAACAGGGCACGGCC
GACGAGGTGCTGAACCGGCCGCGCCATCCTTATACCATCAAACTGATCGGCGCCGTGCCGCGGCTGGAAGCGGCGGCCCC
GCCGATCCCCGCCGATGCGCCGGTGGTGCTGGATGTGGCGGGGCTTGAGAAGGTCTATCGCGGCGAGCGCAGCCTGTTCT
CGCGCGGATCCGGCCGCGAGGTCCATGCGGCGGACGATGTGACGCTGACCCTCAGGCGCGGCGAGGTGCTGGGCATCGTC
GGCGAAAGCGGCTCGGGCAAATCGACCGTCGGCCGATGCCTGGTCCGGCTGATCGAGCCGGATGGCGGCCGGGTAATGCT
GGATGGCACGGATATGATGGCGCAGGGCGCGCGCGGGCTGAAACAGGCGCGCGGCCGGATGCAGGTGGTCTTCCAGGACC
CCTTCGCCTCGCTGAACCCGCGGCGCAAGGTCGGCGACATCATCTGCGAGGCGCCGCTTGCCCATGGCCGGCCGGCGGCC
GAGGTGCGTCGGCGGATGTTCGAACTGCTGAAACTGGTCGGCCTGCCCGAGGCCGCGGCCGATCGCTGGCCGCATGAATT
CTCGGGCGGCCAGCGCCAGAGAATCGGCATCGCCCGGGCCCTGGCGCTGGATCCCAAGGTGCTGATCGCCGACGAGGCGG
TCTCGGCGCTGGATGTCTCGGTCCAGGCCCAGGTCCTGGCGCTGCTCGACGATCTGCGCACGCGCCTCGATCTCGCGATC
CTGTTCATCACCCATGATCTGCGCGTGGCGGCCCGCATCTGCCACCGGGTGGCGGTGATGCGCCGCGGCCGCATCGTCGA
AGAAGGGCCGACCGCCCGGGTCTTCGAGACCCCGTCCCACGACTATACCCGCGCGCTGCTGGCCGCGATCCCCGGACGGC
ACTGGACGGCACCCGCCGCCCCGGGCCAGGGCGATATCGCCGGCGCCGCGCTCGCGCAAGGAGGCTGA

Protein sequence :
MSGALLSIEGLTIPLPEGADRPHAIEDVSFDIGRGEIVCIVGESGSGKSMSASAVMGLLPEGLTPSAGRVVFGGRDLLGL
PAAERRRLRGGKAAMIFQEPMTALNPVMTVGDQIAEALVAHGMRDRAAIRRRVIELLTRVDLPDPEKIVKSHPFRLSGGQ
RQRVMIAIALANEPDLLIADEPTTALDVTTQAQILELIREIQARTGMGVMFITHDFGVVAEIAHRVVVMCAGRVVEQGTA
DEVLNRPRHPYTIKLIGAVPRLEAAAPPIPADAPVVLDVAGLEKVYRGERSLFSRGSGREVHAADDVTLTLRRGEVLGIV
GESGSGKSTVGRCLVRLIEPDGGRVMLDGTDMMAQGARGLKQARGRMQVVFQDPFASLNPRRKVGDIICEAPLAHGRPAA
EVRRRMFELLKLVGLPEAAADRWPHEFSGGQRQRIGIARALALDPKVLIADEAVSALDVSVQAQVLALLDDLRTRLDLAI
LFITHDLRVAARICHRVAVMRRGRIVEEGPTARVFETPSHDYTRALLAAIPGRHWTAPAAPGQGDIAGAALAQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-75 46
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-75 46
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-75 46
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-75 46
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-89 43