Gene Information

Name : yfeD (TMO_2737)
Accession : YP_006372159.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Virulence
Product : Chelated iron transport system membrane protein yfeD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3029862 - 3030698 bp
Length : 837 bp
Strand : +
Note : -

DNA sequence :
ATGAACCCGATCGACGCCCTGATCACCCCCTTCCGCTTCGCCTTCATGGCGGATGCCCTGATCATCTCGCTGCTGGTGGC
GGTGCCGGCGGCACTGCTGTCCTGCTTTCTGGTGCTGAAGGGCTGGTCGTTGCTGGGCGATGCCATCTCCCATGCCGTCC
TGCCGGGGGTGGTGATCTCCTACGCCCTGGGCCTGCCCTATGTCGCGGGCGCCTTTGTCGCCGGCCTCGCCTGTGCGGTG
GGGACCGGCTATATCCGCGACCATTCGCGCGTCAAACCTGATACGGTGATGGGCGTGGTCTATTCGGGCATGTTCGGCGC
GGGGCTGGTGCTCTATGTCTGGATCCGCCCGGATGTGCATCTGGACCACATCCTGTTCGGCGACATGCTGGGGGTCGCGC
GTGCCGACATCCTGCTCACCGGCGGGATCGCACTGGTGACCACCGCGGCGATCGCCGTCAAATGGCGCGACCTGCAGCTT
CATGCCTTCGATCCGGTGCAGGCACGCGCAGTCGGGCTGCCGACCCGGCTTCTGCACTACGGCCTGCTCTGCCTGATTTC
GGCAACGGTGGTCGGCGCCCTGGCCGCCGTCGGCATCATCCTGGTGATCGCCCTGCTGATCGCCCCGGGCGCCATCGCCC
TGCTCGTCACCCGCAGCCTGGGGCGGATGCTGCTGGTCGCCGTGGCGGTGGCCGCCGGCGCCTCGGCAGCGGGCCTCATC
GCCGCCTTCTACATCGATGCGGCCCCGGCACCGACCATCGTGCTGCTGCTGGCGGCCGGCTTCGTGGTGGCCTTCGCCAT
ATCGGGTCAACGGGCGGCGATCGCGGCACGCGGCTGA

Protein sequence :
MNPIDALITPFRFAFMADALIISLLVAVPAALLSCFLVLKGWSLLGDAISHAVLPGVVISYALGLPYVAGAFVAGLACAV
GTGYIRDHSRVKPDTVMGVVYSGMFGAGLVLYVWIRPDVHLDHILFGDMLGVARADILLTGGIALVTTAAIAVKWRDLQL
HAFDPVQARAVGLPTRLLHYGLLCLISATVVGALAAVGIILVIALLIAPGAIALLVTRSLGRMLLVAVAVAAGASAAGLI
AAFYIDAAPAPTIVLLLAAGFVVAFAISGQRAAIAARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-53 62
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-53 62
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-53 62
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-53 62
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-53 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_006372159.1 Chelated iron transport system membrane protein yfeD BAC0352 Protein 8e-54 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_006372159.1 Chelated iron transport system membrane protein yfeD VFG0528 Protein 7e-54 62