Gene Information

Name : yfeC (TMO_2736)
Accession : YP_006372158.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Virulence
Product : Chelated iron transport system membrane protein yfeC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3029005 - 3029865 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTGCTGCTCGAACCTTTCGCCTATGACTACATGGTCAACGCGATCTGGGTCTCGGCCCTGGTCGGCGGGGTCTG
CGGCCTGCTCTCCTGCTATCTGATGCTGAAGGGCTGGTCGCTGATCGGCGATGCGCTGTCCCATGCCATCGTGCCGGGCG
TGGCCGGCGCCTGGATGATCGGCCTGCCCTTCTCGCTCGGGGCCTTCCTGGCCGGCGGGCTCGCGGCCGGCGCGATGCTG
TTCATCCGCCGCCGCAGCCGCCTGAAAGAAGATGCGGTGATCGGGCTGATCTTCTCGGCCTTCTTCGGCCTCGGCCTGTT
CATGGTCTCGGTCTCGCCGGTGCCCGTGGACGTCCAGGCGATCGTGCTCGGCAACATCCTGGCGGTGACGCCGGCAGACA
CCCTTCAGCTCGTGTTGATCTCGGCCGTCACCCTGGCCGTGCTGGCGGTGACCTGGAAGGACCTGATGGTGGTGTTCTTC
GACGAGGTCCATGCCCGCTCCGTCGGGCTGGCGGTCACCCGCCTGAAACTCATCTTCTTTACCCTGCTCGCCGCCGCAAC
CGTGGCCGCCCTCCAGACGGTCGGCGCCTTTCTGGTGATCTCCCTGGTGGTGGCACCCGGTGCAACCGCCTTCCTGCTCA
CCGACCGCTTCCCAAGGCTGCTGATCATCGCCGGCCTGATCGGATCGCTCACCAGCCTGGCCGGCGCCTATGTCAGCTAT
TTCCTGGACGGCGCCACCGGCGGAATTATCGTGGTGCTGCAGACCCTGGTGTTTCTCGCCGCCTTCGTCGCCGCCCCGCG
CCATGGGCTGATCGCCGCCCGGCGCCACCGCGCCTCGCCGGAGGGAGGATCGGTCGCATGA

Protein sequence :
MSLLLEPFAYDYMVNAIWVSALVGGVCGLLSCYLMLKGWSLIGDALSHAIVPGVAGAWMIGLPFSLGAFLAGGLAAGAML
FIRRRSRLKEDAVIGLIFSAFFGLGLFMVSVSPVPVDVQAIVLGNILAVTPADTLQLVLISAVTLAVLAVTWKDLMVVFF
DEVHARSVGLAVTRLKLIFFTLLAAATVAALQTVGAFLVISLVVAPGATAFLLTDRFPRLLIIAGLIGSLTSLAGAYVSY
FLDGATGGIIVVLQTLVFLAAFVAAPRHGLIAARRHRASPEGGSVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-80 74
sitC NP_461784.1 permease Virulence SPI-1 Protein 8e-80 74
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-80 74
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-80 74
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 6e-80 74
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-35 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-35 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-35 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-35 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC BAC0351 Protein 4e-80 74
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC BAC0441 Protein 3e-66 62
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC BAC0352 Protein 6e-36 42
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC BAC0442 Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC VFG0527 Protein 3e-80 74
yfeC YP_006372158.1 Chelated iron transport system membrane protein yfeC VFG0528 Protein 6e-36 42