Gene Information

Name : TMO_2734 (TMO_2734)
Accession : YP_006372156.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3027174 - 3028073 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCATGCGTTCCATCGCCGCCGTTCTGCTCGCCCTCGTAATGTCCGGCGCCGCGGCCCTGCCGGCGCAGGCGGCGGA
TAAGCTGAAGGTGCTGACCACCTTCACGGTGATCGCCGACATCGCCGCCAATGTCGCGGGCGATGCGGCCGAGGTCGTGT
CGATCACGAAGCCCGGTGCCGATATCCACACCTACAGCCCCACCCCCGGCGACATCCGTCGGGCCCTGGGGGCGGGGCTG
GTGCTACGCAACGGGCTCAACCTCGAACTCTGGTTCGAGAAATTCCTGCGCAACCTGGGCGAGGTGCCGGCCGCGACCGT
CTCGGACGGCATCAGCCCGATCGGCATCACCGAGGGCCCCTATGAGGGCAAGCCCAACCCGCATGCCTGGATGTCGCCCG
AGGCGGCGAAGATCTATGTCGCCAATATCCGCGACGCCCTCTCGGCCGCCGATCCGGGCCATGCCGCAACCTATGCCGCC
AATGCCGCCGCCTATACGGCCCGGATCGATGCGGTGGCGGCACCGATCCGCGAACGGCTGGCGGCCCTGCCGCCGGACCG
GCGCTGGCTGGTGACGAGCGAAGGCGCCTTCTCTTATCTCGCCCGCGATTTCGGGCTGAAAGAAGCCTGGATCTGGCCGA
TCAATGCCGATGGTCAGGGCACGCCCCAGCAGGTTCGCCGGGTGATCGACACCGTGCGCGAGCATCAGATCCCGGTGGTG
TTCTCGGAAAGCACCGTCTCGCCCGATCCGGCCCGGCAGGTCGCCCGCGAGACAGGCGCGCGCTATGGCGGCGTGCTTTA
TGTCGACACGCTGACCGACGCCGACGGGCCGGTGCCGACCTATCTGGACCTGCTTCGCGTCACCGCCGGCCGCATCGCCG
ACGAACTCTCCCGTCCCTGA

Protein sequence : 
MGMRSIAAVLLALVMSGAAALPAQAADKLKVLTTFTVIADIAANVAGDAAEVVSITKPGADIHTYSPTPGDIRRALGAGL
VLRNGLNLELWFEKFLRNLGEVPAATVSDGISPIGITEGPYEGKPNPHAWMSPEAAKIYVANIRDALSAADPGHAATYAA
NAAAYTARIDAVAAPIRERLAALPPDRRWLVTSEGAFSYLARDFGLKEAWIWPINADGQGTPQQVRRVIDTVREHQIPVV
FSESTVSPDPARQVARETGARYGGVLYVDTLTDADGPVPTYLDLLRVTAGRIADELSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-77 64
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-78 64
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-78 64
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-77 64
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-77 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TMO_2734 YP_006372156.1 iron ABC transporter substrate binding protein BAC0349 Protein 5e-78 64
TMO_2734 YP_006372156.1 iron ABC transporter substrate binding protein BAC0439 Protein 2e-73 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TMO_2734 YP_006372156.1 iron ABC transporter substrate binding protein VFG0525 Protein 5e-78 64