Gene Information

Name : acoD (TMO_1069)
Accession : YP_006370492.1
Strain : Tistrella mobilis KA081020-065
Genome accession: NC_017956
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1177358 - 1178905 bp
Length : 1548 bp
Strand : +
Note : -

DNA sequence :
ATGTTCCGGGAGGAAGACCTGATGGATACGATCCAGCCGAAGAAGATGGGGCTCGACGTCGACAACCCGTATAAGGGGCA
GTACGAGAACTATATCGGCGGCCAGTGGGTGGCCCCGGTCGGTGGCGAATACTTCGACAATGTTTCGCCGATCACCGGTA
AGCCCTTCTGCCGGGTGCCGCGTTCGGGTGCGGCCGACATCGAGAAGGCGCTGGACGCCGCCCATGCCGCCCGCAAGTCC
TGGGCGCGCACCTCGACCACCGAGCGCGCCAACCTGCTGTGGCGCATGGCCGATCGGATGGAGCAGAACCTGCTGCTGCT
GGCGGTGGCCGATTCGATCGACAACGGCAAGCCGGTGCGCGAGACCATGGCGGCCGACCTGCCGCTGGCCATCGACCATC
TGCGCTATTTCGCCGGCTGCATCCGCGCCCAGGAGGGCGGGATCTCCGAGATCGACCACGACACCGTCGCCTATCATTTC
CATGAGCCGATCGGCGTCGTCGGCCAGATCATCCCCTGGAACTTCCCGCTGCTGATGGCGGCCTGGAAGCTGGCCCCGGC
GCTGGCGGCGGGCTGCTGCGTGGTGCTGAAGCCCGCCGAGCAGACCCCGGCCTCGATCCTGCTGCTGATGGAGCTGGTCG
GCGACCTGTTCCCGGCCGGTGTGATCAACGTGGTCAACGGCTATGGCCGCGAGGCCGGCCATGCGCTGGCGACCAGCACC
CGGATTTCCAAGCTCGCCTTCACCGGTTCCACCCCCACCGGCAAGCTGGTGCTGAAGGCGGCGGCCGACAATCTGATCCC
GACCACGGTCGAGCTGGGCGGCAAGAGCCCGAACATCTTCTTCGCCGACGTCATGGACCGCGACGACGCGTTCTTCGACA
AGGCGCTGGAAGGGCTCGCCATGTTCGCGCTGAACCAGGGCGAGGTCTGCACCTGTCCGTCGCGCGTGCTGATCCAGGAA
TCGATCTATGACCGCTTCATCGAGCGCGCGATCAAGCGCGTCGAGGCGATCACCACCGGCAACCCGCTCGACCGCAACAC
CATGGTCGGTGCGCAGGTGTCGGAAGCGCAGATGGAGAAGATCCTCTCCTATATCGATATCGGCCGTCAGGAAGGCGCGC
AGTGCCTGACCGGCGGTGAGCGCAGCCGCCTGTCGGAAGACCTGGCCAACGGCTTTTACGTCAAGCCGACCATGCTGCTC
GGCAACAACAAGATGCGGATCTTCCAGGAAGAGATCTTCGGCCCCGTCGCCTCGGTCATGACCTTCAAGGACGAGGACGA
GGCGCTGGAGATCGCCAACGATACCTTCTACGGCCTGGGCGCCGGGGTGTGGAGCCGTGACGGCACCCGCGCCTATCGCA
TGGGCCGCGAGATCGAGGCCGGCCGCGTCTGGACCAACTGCTACAACCTCTATCCCGCCCACGCCGCCTTCGGTGGTTAC
AAGCAGTCGGGCATCGGCCGCGAGAACCACAAGATGGCGCTGTCGCACTATCAGCAGACCAAGTGCCTGCTGGTCAGCTA
CAACCCGAACGCCCTGGGCTTCTTCTGA

Protein sequence :
MFREEDLMDTIQPKKMGLDVDNPYKGQYENYIGGQWVAPVGGEYFDNVSPITGKPFCRVPRSGAADIEKALDAAHAARKS
WARTSTTERANLLWRMADRMEQNLLLLAVADSIDNGKPVRETMAADLPLAIDHLRYFAGCIRAQEGGISEIDHDTVAYHF
HEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCCVVLKPAEQTPASILLLMELVGDLFPAGVINVVNGYGREAGHALATST
RISKLAFTGSTPTGKLVLKAAADNLIPTTVELGGKSPNIFFADVMDRDDAFFDKALEGLAMFALNQGEVCTCPSRVLIQE
SIYDRFIERAIKRVEAITTGNPLDRNTMVGAQVSEAQMEKILSYIDIGRQEGAQCLTGGERSRLSEDLANGFYVKPTMLL
GNNKMRIFQEEIFGPVASVMTFKDEDEALEIANDTFYGLGAGVWSRDGTRAYRMGREIEAGRVWTNCYNLYPAHAAFGGY
KQSGIGRENHKMALSHYQQTKCLLVSYNPNALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-145 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-151 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
acoD YP_006370492.1 acetaldehyde dehydrogenase VFG0082 Protein 6e-146 65