|
Name : clpC (MODMU_3615) Accession : YP_006367504.1 Strain : Modestobacter marinus BC501 Genome accession: NC_017955 Putative virulence/resistance : Virulence Product : genetic competence negative regulator ClpC/MecB Function : - COG functional category : - COG ID : - EC number : - Position : 3605791 - 3608346 bp Length : 2556 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator DNA sequence : ATGACCAATGGTTTCCCGGGCGCGCCGTTCGGCGGCGGTCCCTTCGACGACTTCTTCCAGGCCTTCCTGGGCGGTCCCGG CGCACGCCGGGGCATGCAGCGGGTGGACATCACCCAGCTGCTCAGCTCGCACTCCCGCGAGGTGGTGTCCGCCGCAGCGC GGCAGGCCGCCGAGTGGGGGAGCCCGGACCTGGACACCGAGCACCTGCTCTGGGCCATGGCCGGTCACGAGCCCACCCGC ACGCTGCTGTCCCGCAGCGGGGCGGACCCCGACCGGCTGCAGGCCGACCTCGCCGGCCAGCTGACCCGGGGTGAGCCGAC CGGGCAGGCCCCGGCGCTGACCCCCGCGGCCAAGCGGGCGCTGCTCGACGCCCACCAGGTGTCCCGGGCCAGCGGCTCGA CCTACATCGGGCCCGAGCACCTGCTCTTCGCGCTCGCGCTCAACCCCGACTCCGGTGCCGGCCGGCTCCTCGGCGGCGCA CGGGTGACCCCCGAGGGGCTGCAGCGGGCGGCCGCCGGTGGTCCGGTCCCGGCCGGGGCGGGCGGCGGCGGGAACGAGCA GCCGCCGTCGAGCACCCCGACCCTCGACGAGTACGGCCGCGACCTCACCGCGATGGCCCGCGACGGGAAGATCGACCCGG TCATCGGCCGCGCGCAGGAGATCGAGCAGACCATCGAGGTGCTGTCCCGGCGGAACAAGAACAACCCGGTGCTCATCGGT GAGGCCGGCGTCGGCAAGACCGCGATCGTCGAGGGCATCGCCCTGCAGATCGTCGACGGCGACGTCCCCGAGTCGCTGCG CGGCCGCCGGCTGGTCGAGCTGGACCTGACCGGCCTGGTCGCGGGCACCCGCTACCGCGGTGACTTCGAGGAGCGGCTCA AGAAGGTGATGGACGAGATCCGCGAGCACAGCGACGAGGTGATCGTCTTCATCGACGAGCTGCACACCGTCGTCGCCGCG GGTGGCTCCGAGGGGTCGGCCGGTGCGGGCAACATGCTCAAGCCGGCGCTGGCCCGCGGTGAGCTGCACATCATCGGCGC CACGACGCTGGAGGAGTACCGGCGCAACATCGAGAAGGACGCCGCCCTCGAGCGCCGCTTCCAGCCGGTCCTGGTCCCCG AGCCCAGCACGCTGGACACCATCGAGATCCTCCGCGGGCTCCGCGACCGGTACGAGGCGCACCACCAGGTGCGGTTCACC GACGAGGCCCTGGTGGCCGCGGCGGAGCTCTCCGAGCGGTACGTCACCGACCGGCACCTGCCGGACAAGGCGATCGACCT GATCGACCAGGCCGGCGCCCGCACCCGGCTGCGGGTCAAGCGGCCGACCACCGACCTGCGCGAGCTGGAGCAGCGGGTGC TGGAGCTGCAGCGGGAGAAGGACCAGGCGGTCGCGGCCGAGCACTACGAGCGCGCCTCCACGCTGCGGGACCAGATCGGC ACCGCCCAGGCCGACCTCGAGCAGGCCCGGTCCGGCGGCGAGGGCGGCATCCCCGAGGTGGGCGTGCCCGAGATCGCCGA GGTGGTCTCCCGGGCCACCGGCATCCCGGTGGCGCAGCTGACCCAGGAGGAGCGCGACCGGCTGCTGCGGCTGGAGGACG TCCTGCACGAGCGGGTCGTCGGCCAGGACGAGGCGGTCGAGGTGGTCGCCGAGGCGATCCGCCGCTCGCGCGCCGGGCTC GGTGACCCGGACCGGCCGATCGGCAGCTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGGGCGCT GGCGGAGGCGCTGTTCGGCGACTCCGACCGGATGGTCCGGCTGGACATGAGCGAGTTCCAGGAGCGGCACACGGTCAGCC GGCTGGTCGGCTCGCCCCCCGGCTACGTCGGGTACGAGGACGCCGGTCAGCTGACCGAGGCGGTGCGTCGCCGTCCCTAC TCGGTGGTGTTGCTCGACGAGATCGAGAAGGCCCACCCGGACGTGTTCAACACGCTGCTGCAGCTGCTGGACGCCGGCCG GCTCACCGACTCCCAGGGCCGCACGGTCGACTTCAGCAACACCGTGGTGATCATGACCAGCAACCTGGGGTCGGAGGCGA TCGTCAACGCCGGCCGCGGCCCGCTGGGGTTCACCGCCAACGGCAACAGCGGCGACGACCTGCGCGACCAGGTGATGCGG CGGCTGCGGGACGCGTTCCGGCCGGAGTTCCTCAACCGGATCGACGAGATCGTGGTCTTCCGGCAGCTCGAGGCCGAGCA GCTGGCGCGGATCACCGACCTGCTGCTGGACGAGACCCGGCGCCGGCTGTCCGCCCAGGACATCGCCGTCGAGGTCACCC CGGCGGCGGTGGCCTGGCTGGCCGAGCGCGGGCACGAGCCGCAGTTCGGTGCGCGGCCGCTGCGCCGGGCGATCCAGCGC GAGGTCGACAACCGGCTGTCCCGGCTGGTGCTCGGTGGTGAGCTCTCGCCCGGCCAGCAGGTGACGGTCGACGTCGCCGA CGGCGACCTGGACCTGCAGGTGTCCGACCGCCGGCCGAACAGCGTGGCGGAGGCCGAGGCCCCCGCCGCCGTCTGA Protein sequence : MTNGFPGAPFGGGPFDDFFQAFLGGPGARRGMQRVDITQLLSSHSREVVSAAARQAAEWGSPDLDTEHLLWAMAGHEPTR TLLSRSGADPDRLQADLAGQLTRGEPTGQAPALTPAAKRALLDAHQVSRASGSTYIGPEHLLFALALNPDSGAGRLLGGA RVTPEGLQRAAAGGPVPAGAGGGGNEQPPSSTPTLDEYGRDLTAMARDGKIDPVIGRAQEIEQTIEVLSRRNKNNPVLIG EAGVGKTAIVEGIALQIVDGDVPESLRGRRLVELDLTGLVAGTRYRGDFEERLKKVMDEIREHSDEVIVFIDELHTVVAA GGSEGSAGAGNMLKPALARGELHIIGATTLEEYRRNIEKDAALERRFQPVLVPEPSTLDTIEILRGLRDRYEAHHQVRFT DEALVAAAELSERYVTDRHLPDKAIDLIDQAGARTRLRVKRPTTDLRELEQRVLELQREKDQAVAAEHYERASTLRDQIG TAQADLEQARSGGEGGIPEVGVPEIAEVVSRATGIPVAQLTQEERDRLLRLEDVLHERVVGQDEAVEVVAEAIRRSRAGL GDPDRPIGSFLFLGPTGVGKTELARALAEALFGDSDRMVRLDMSEFQERHTVSRLVGSPPGYVGYEDAGQLTEAVRRRPY SVVLLDEIEKAHPDVFNTLLQLLDAGRLTDSQGRTVDFSNTVVIMTSNLGSEAIVNAGRGPLGFTANGNSGDDLRDQVMR RLRDAFRPEFLNRIDEIVVFRQLEAEQLARITDLLLDETRRRLSAQDIAVEVTPAAVAWLAERGHEPQFGARPLRRAIQR EVDNRLSRLVLGGELSPGQQVTVDVADGDLDLQVSDRRPNSVAEAEAPAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-162 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006367504.1 | genetic competence negative regulator ClpC/MecB | VFG0080 | Protein | 1e-145 | 52 |
| clpC | YP_006367504.1 | genetic competence negative regulator ClpC/MecB | VFG0079 | Protein | 1e-174 | 50 |
