Gene Information

Name : SSUST1_0227 (SSUST1_0227)
Accession : YP_006358169.1
Strain : Streptococcus suis ST1
Genome accession: NC_017950
Putative virulence/resistance : Unknown
Product : glycosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 219420 - 221045 bp
Length : 1626 bp
Strand : -
Note : -

DNA sequence :
ATGACAATAGACAAACGAAAGGTTGTTTATCAAATCTACCCAAAATCTTACAAGGATACAACTGGAAATGGTGTAGGGGA
TCTGCGTGGGATTATTGAAAAACTCCCATATTTAAAAGAGCTAGGTATTGATATGATTTGGCTCAACCCTTTCTACCCAA
GTCCTCAACGAGACAACGGTTATGACATTTCAGATTATACAGCCGTCAATCCTGATTTTGGGACCATGGCTGACTTTGAA
GAAATGGTGGCTGTCGGCAAAGAACTGGGCATCGAATTCATGCTGGACATGGTCCTCAACCACTGCTCGACAGACCACGA
ATGGTTCCAAAGGGCCCTAGCTGGCGACAAATATTACCAGGATTTCTTTATCCTGCGTGACCAGCCGACTGACTGGGTGT
CTAAATTTGGTGGCAATGCCTGGGCTCCTTTTGGAGATACTGGGAAATACTACCTCCATCTCTTTGACGTGACCCAAGCC
GACCTCAACTGGCGAAACCCTCAGGTCCATGAAGAACTGTTCAAGGTGGTCAACTTCTGGAAAGACAAGGGCGTCAAAGG
CTTCCGCTTCGACGTTATCAACCTGATTGGTAAGGACGAAGTCCTAGAAGATTGCCCAATTAATGACGGCAAGCCAGCTT
ATACCGACCGCCCAATTACCCACGACTACCTCAAGATGATGAATAATGCTACTTTTGGTAGTGAAAAGGGCTTCATGACC
GTTGGGGAAATGTCTGCCACCACCATTGAAAACTGTATCCTCTACACAGCTCCTGAACGGGAAGAATTGTCCATGGCCTT
CAACTTCCACCACTTGAAAGTGGATTACAAGAACGGGCAAAAATGGACCATCATGGACTTTGACTTTGAAGAACTCAAAC
GCCTCTTCCACACTTGGGGCGAAGAGATGTCCGTTGGAAATGGCTGGAACGCCCTTTTCTACAACAACCACGACCAACCT
CGTGCCCTCAACCGCTTTGTTGATGTGGAGAATTTCCGCAAGGAAGGAGCAACCATGTTGGCAGCCTCTATCCACCTATC
ACGCGGCACACCTTACATCTACATGGGTGAGGAGATCGGTATGATCGACCCTGACTACGATAGTATGGACGACTACGTGG
ACGTGGAGTCTATCAATGCCTACCAGATGCTCTTGGACCAAGGTCACACGCCTAAGCAGGCCTTCAAGATTATCCAGGCC
AAGTCCCGTGACAATTCCCGCACCCCGATGCAATGGGACGCTTCTGACAATGCAGGCTTCTCAACAGGCACTCCTTGGTT
GAAAGCTGGCAAATCCTACCAAACGATTAACGTTGAACAGGAAAAAACAGGCCCAATCTTTACCTTCTATCAAGAGTTAA
TTCGACTCCGAAAAGAACTCCCCCTCATCTCAGAAGGGGATTACAAGGCAGCCTACAAGGATAGCCAGAAAGTCTACGCC
TTTGAACGCTTGCTAAATGGCGAAAAACTGTTGGTCCTCAACAATTTCTTTGCAGAAGAGGTTGAACTAGATCTGGCAGA
CGACTATGCCCACGGCCAAGTCCTCATTAGCAACTATCCTGACAACAAACTAGGCAAAAAAATCATTCTCAAACCTTACC
AAGCATTGGCAATTCAAGTTAAATAA

Protein sequence :
MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLKELGIDMIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFE
EMVAVGKELGIEFMLDMVLNHCSTDHEWFQRALAGDKYYQDFFILRDQPTDWVSKFGGNAWAPFGDTGKYYLHLFDVTQA
DLNWRNPQVHEELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRPITHDYLKMMNNATFGSEKGFMT
VGEMSATTIENCILYTAPEREELSMAFNFHHLKVDYKNGQKWTIMDFDFEELKRLFHTWGEEMSVGNGWNALFYNNHDQP
RALNRFVDVENFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMDDYVDVESINAYQMLLDQGHTPKQAFKIIQA
KSRDNSRTPMQWDASDNAGFSTGTPWLKAGKSYQTINVEQEKTGPIFTFYQELIRLRKELPLISEGDYKAAYKDSQKVYA
FERLLNGEKLLVLNNFFAEEVELDLADDYAHGQVLISNYPDNKLGKKIILKPYQALAIQVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 7e-104 43