Gene Information

Name : LLNZ_09750 (LLNZ_09750)
Accession : YP_006357292.1
Strain : Lactococcus lactis NZ9000
Genome accession: NC_017949
Putative virulence/resistance : Unknown
Product : transposase AB of IS1068
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1873048 - 1873887 bp
Length : 840 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
TTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTCGCTCAGGTTTCTATGAATACAT
GCATCGTCGTCCTTCAAAACAACAAGTGGAGAGAGAAATTCTCTCAGAGAAGATAAAAGCTGTCTTTCATGAGCATAAGG
GACGCTATGGTGCGGTTAGAATTACCAAGGTACTTCATAATACTGGTATTATGACCAACACGAAACGTGTTGGGAAACTG
ATGCACTTGATGGGACTTTATGCCAAGGGAAGCCGTTATAAATATAAACATTACAACAGAAAAGGAGCTTCGCTTTCAAG
ACCCAATTTAATTAATCAGATCTTTAAAGCAACAGCTCCTAATAAAGTATGGCTGGGAGACATGACCTATATCCCTACCA
AAGAAGGCACCTTATACTTAGCCGTGAATATCGACGTTTTTTCACGTAAGATTGTAGGCTGGTCAATGTCTTCACGGATG
CAAGATAAACTGGTGAGGGATTGCTTCTTACAAGCTTGTGGGAAAGAACATCCTCAGCCTGGCTTGATTGTCCATACTGA
TCAAGGGAGTCAATATACAAGCTCTCGTTATCAATCTACTCTTCGTCAAGTCGGTGCTCAATCTAGCATGAGTCGTAAAG
GAAATCCCTATGACAATGCAATGATGGAGTCTTTTTATAAGACGCTAAAGAGAGAGCTTATTAATGATGCTCATTTTGAG
ACAAGAGCTGAGGCTACTCAAGAAATATTTAAATACATTGAGACCTATTACAATACAAAAAGGATGCATTCAGGTCTTGA
TTACAAGTCGCCAAAAGACTTTGAAAAATATAATTCTTAA

Protein sequence :
MKHHGKIKIKHAVKVLKVSRSGFYEYMHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKL
MHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRM
QDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFE
TRAEATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-38 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-38 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-38 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-39 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-38 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-38 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-38 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-38 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-38 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-39 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-39 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LLNZ_09750 YP_006357292.1 transposase AB of IS1068 VFG1706 Protein 6e-39 42