Gene Information

Name : LLNZ_05875 (LLNZ_05875)
Accession : YP_006356564.1
Strain : Lactococcus lactis NZ9000
Genome accession: NC_017949
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1104599 - 1105546 bp
Length : 948 bp
Strand : +
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence :
ATGCTAAATAAACATAAGAAGTTTCTACTTGCTTTTGTGCTAATTATGACAGCTATTTCTTTAGTGGCTTGTTCTAAAAA
TACAAATCAGTCTATAAAAAAAGCGGATGACAAATTAAATGTAGTGGTCACTAATTCTATCCTGGCAGACATGACTAAAA
ATATTGCCAAAGATAAAATTAACTTGCACAGTATCGTTCCTGTCGGGAAAGACCCTCATGAATATGAACCTTTGCCAGAT
GATGTTCAAAAAACTTCTAGAGCTGATTTAATTTTCTATAATGGAATAAACTTGGAGACTGGCGGAAATGCTTGGTTTAC
AAAATTAGTCAAAAATGCAAATAAAAAAGAAAATGTAGACTACTTTCCAGTCAGTAAAGGGGTTGATGTCATCTATCTTG
AAGGAAAGAGCACTGACGGAAAAGAAGATCCACACGCCTGGCTTAATTTAGAAAATGGGATAATCTATGCCCAAAACATT
GAAAAAGAATTATCAAAAAAAGATCCTGACCAGAAAGATTTTTATCAAAACAACTTGAATAAGTATATAAACAAACTAAC
TAAGCTAGATAAGGAAGCTAAAGCAAAATTTGCTTCAATTCCAGAAAATAAAAAAATGATTGTGACAAGCGAAGGCTGCT
TCAAATATTTTTCTAAAGCTTATGATATCCCTTCTGCTTATATTTGGGAAATTAATACTGAAGAAGAAGGAAGCCCAGAA
CAAATAAAAAATTTAGTGAGAAAACTAAGAGCCACAGAGCTTGCATCTCTGTTTGTAGAGAGTAGCGTCGATAGTCGGCC
GATGAAAACAGTGTCTAAGGATACGAAAATCCCAATTTATTCAACAATCTTTACAGACTCAGTAGCAAAAAGTGGGGAGA
ATGGGGATAGTTATTATCGTATGATGGAATGGAATATAAATAAAATCTATGACGGACTTTCAAAATAG

Protein sequence :
MLNKHKKFLLAFVLIMTAISLVACSKNTNQSIKKADDKLNVVVTNSILADMTKNIAKDKINLHSIVPVGKDPHEYEPLPD
DVQKTSRADLIFYNGINLETGGNAWFTKLVKNANKKENVDYFPVSKGVDVIYLEGKSTDGKEDPHAWLNLENGIIYAQNI
EKELSKKDPDQKDFYQNNLNKYINKLTKLDKEAKAKFASIPENKKMIVTSEGCFKYFSKAYDIPSAYIWEINTEEEGSPE
QIKNLVRKLRATELASLFVESSVDSRPMKTVSKDTKIPIYSTIFTDSVAKSGENGDSYYRMMEWNINKIYDGLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 1e-109 73
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 9e-110 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LLNZ_05875 YP_006356564.1 manganese ABC transporter substrate binding protein VFG1359 Protein 2e-104 71
LLNZ_05875 YP_006356564.1 manganese ABC transporter substrate binding protein VFG2165 Protein 2e-87 57
LLNZ_05875 YP_006356564.1 manganese ABC transporter substrate binding protein VFG2157 Protein 2e-80 55