Gene Information

Name : LLNZ_05555 (LLNZ_05555)
Accession : YP_006356500.1
Strain : Lactococcus lactis NZ9000
Genome accession: NC_017949
Putative virulence/resistance : Unknown
Product : transposase AB of IS1068
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1032982 - 1033776 bp
Length : 795 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
TTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTCGCTCAGGTTTCTATGAATACAT
GCATCGTCGTCCTTCAAAACAACAAGTGGAGAGAGAAATTCTCTCAGAGAAGATAAAAGCTGTCTTTCATGAGCATAAGG
GACGCTATGGTGCGGTTAGAATTACCAAGGTACTTCATAATACTGGTATTATGACCAACACGAAACGTGTTGGGAAACTG
ATGCACTTGATGGGACTTTATGCCAAGGGAAGCCGTTATAAATATAAACATTACAACAGAAAAGGAGCTTCGCTTTCAAG
ACCCAATTTAATTAATCAGATCTTTAAAGCAACAGCTCCTAATAAAGTATGGCTGGGAGACATGACCTATATCCCTACCA
AAGAAGGCACCTTATACTTAGCCGTGAATATCGACGTTTTTTCACGTAAGATTGTAGGCTGGTCAATGTCTTCACGGATG
CAAGATAAACTGGTGAGGGATTGCTTCTTACAAGCTTGTGGGAAAGAACATCCTCAGCCTGGCTTGATTGTCCATACTGA
TCAAGGGAGTCAATATACAAGCTCTCGTTATCAATCTACTCTTCGTCAAGTCGGTGCTCAATCTAGCATGAGTCGTAAAG
GAAATCCCTATGACAATGCATTGATGGAGTCTTTTTATAAGACGCTAAAGAGAGAGCTTATTAATGATGCTCATTTTGAG
ACAAGAGCTGAGGCTACTCAAGAAATATGTCAAGGGCCATCTAAAAATGTTGGTTTTGGGTCATTGAAAATGTAG

Protein sequence :
MKHHGKIKIKHAVKVLKVSRSGFYEYMHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKL
MHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRM
QDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNALMESFYKTLKRELINDAHFE
TRAEATQEICQGPSKNVGFGSLKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0167 YP_281531.1 transposase Not tested Not named Protein 1e-57 64
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-34 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-34 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-34 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-33 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-33 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-33 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-33 41
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-33 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-33 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-33 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 6e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LLNZ_05555 YP_006356500.1 transposase AB of IS1068 VFG1706 Protein 3e-33 41