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Name : LLNZ_05075 (LLNZ_05075) Accession : YP_006356414.1 Strain : Lactococcus lactis NZ9000 Genome accession: NC_017949 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 949426 - 952029 bp Length : 2604 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGACATCGAAAAAATGACAACAACGATGCAAGAAGCACTTGGTTCAGCGCAACAAATTGCGCAAGTTCGTCATCACCA AGTGATTGAAGTTCCACATTTATGGCGAATTTTTGTTCAACCTAATAGTTTTGGGGCGAACTTTTATAAAGATTTAGGGA TTGACCTAGATGACTTTACAAATTTAATTGAAAAAGAAATTGACAAAATTAATTCGGTAGAAGGTTCAAATATTACTTAT GGTCAAAACCTAAGTCCAGATTTGTTCCAAGTATTTACTGAAGCAGACAAAATTGCGCAAAAAATGGGCGATGAATACCT ATCAACTGAGATTATTCTCCTTGCTCTCTTTGAATTAAAACAAAATCCATTGACCGAGTATTTGGTCAGCCATGGACTAA CAAAAGCAAAAGCGCAAGCTGCGATTGAAAAATTACGTGGAGGTGATAAAGTGACCAGTCAAAATGCAGAAGAAACATAC AAAGCACTTGAAAAATATGGGGTGGATCTCGTTGCTCAAGTTAAATCAGGCAATCAAGATCCCGTCATTGGACGTGATGA AGAAATTCGTGATGTCATTCGAGTGCTTTCTCGTAAAACAAAAAACAATCCCGTTCTTATTGGTGAACCTGGGGTTGGTA AAACAGCCATTGTCGAAGGATTGGCACAAAGGATTGTCAGAAAAGACGTTCCTGAAAATCTAAAAGATAAAACAATCTTT TCACTGGATATGGGTGCCTTGATTGCAGGAGCGAAATATCGTGGTGAATTTGAAGAACGTTTGAAAGCAGTCCTTAATGA AGTTAAAAAAGCTGATGGACAAATTATCCTTTTCATTGATGAACTTCATACCATTGTTGGTGCAGGTAAAACAGAAGGTT CAATGGATGCTGGTAACCTTTTGAAACCAATGCTTGCACGTGGTGAACTCCATTTGATTGGGGCAACGACCTTGGATGAA TATCGTAAATACATGGAAACAGATAAAGCACTTGAACGTCGTTTCCAAAAAGTATTGGTCACTGAGCCTACCGTTGAAGA TACGATTTCAATCTTGCGTGGTCTAAAAGAACGTTTTGAAATTCACCATGGGGTGACCATTCATGATAATGCTTTAGTTG CAGCAGCCACATTGTCAAATCGTTATATTACAGACCGTTTCTTACCAGATAAAGCGATCGACTTAATTGATGAAGCCAGT GCAACGATTCGGGTGGAAATGAATTCACTCCCAACTGAACTTGACCAAGCCAATCGTCGCTTGATGCAATTAGAAATTGA AGAAGCAGCCCTCAAAAAAGAACGGGATGATGCTTCTAAGAAACGTCTTGAAATTATACGTGGTGAAATTGCTGAACTTC GAGAAGAAAATAATCAACTCAAAGCCCAATGGGAAGCTGAGAAAAAAGAAGTGGGCAATATTTCTGAAAAACGTAATGAA TTAGAACATGCTCGCCACGAATTGGAAGAAGCCCAAAATGAAGGAAACTTAGAAAAAGCAGCAGCCCTTCGTTATGGTAA AATTCCTGAAATTGAAAAAGAACTCAAAGCTATTGAAGAAAAAGCAAAATCAGATGATTTATCTTTAGTTCAAGAATCAG TCACTGAAGAACAAATCGCCGAAGTGGTTGGACGGATGACTGGTATTCCAATTACCAAATTGGTTGAAGGTGAACGTGAA AAATTACTTCATTTGCCAGAAACACTTCATCAAAGAGTTGTCGGACAAGATGAAGCTGTTGAAGCCGTATCTGATGCCAT TATTCGTGCGCGTGCAGGAATTCAAGACCCTAACCGTCCACTTGGCTCATTCCTCTTCCTTGGACCAACTGGGGTAGGTA AGACCGAACTTGCGAAAGCATTGGCTGAAAATCTCTTTGATTCAGAAGAACATATGGTTCGGATTGACATGAGTGAATAT ATGGAAAAACACAGCGTGTCACGTTTAGTCGGAGCTCCTCCAGGATATGTCGGTTACGATGAAGGAGGCCAATTGACCGA AGCCGTTCGCCGTAATCCTTATACCATCATCTTGCTTGATGAAATCGAAAAAGCACATCCAGATGTCTTCAATATCTTGT TGCAAGTTTTAGATGACGGACGTTTGACCGACTCTAAAGGTGTTCTCGTCGACTTTAAGAATACAGTATTGATTATGACT TCAAATGTCGGTTCTCAATATCTGCTCGATAATGTTGGAGAAAATGGTGAAATTTCTGAAGAAACAACAGAAAATGTGAT GTCGCAACTTCGCGCGCATTTCAAACCAGAATTTTTAAACCGGATTGATGATACCATTCTTTTCAAACCATTGGCGCTTG AAGACATCAAGAACATTATCCTTAAAATGACCAGTCAACTAGCACATCGTCTTGAAGAAATGGAAGTTGAGCTTGAATTG AGTGAAGAAGTAAAAGTTTGGATTGCTGAAAATGCTTATGAACCTGCTTATGGTGCACGCCCACTCAAACGTTACTTGAC AAAAGTCATCGAAAATCCATTAGCTAAGCTGATTATCGGAGGAAAAATTCCACCAAAATCAAAAGTTATTGTAAGGCTTA TAGATAACAAGGTTGACTTTGATGTTCAATCGATTGCTGAATAA Protein sequence : MDIEKMTTTMQEALGSAQQIAQVRHHQVIEVPHLWRIFVQPNSFGANFYKDLGIDLDDFTNLIEKEIDKINSVEGSNITY GQNLSPDLFQVFTEADKIAQKMGDEYLSTEIILLALFELKQNPLTEYLVSHGLTKAKAQAAIEKLRGGDKVTSQNAEETY KALEKYGVDLVAQVKSGNQDPVIGRDEEIRDVIRVLSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKDKTIF SLDMGALIAGAKYRGEFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDE YRKYMETDKALERRFQKVLVTEPTVEDTISILRGLKERFEIHHGVTIHDNALVAAATLSNRYITDRFLPDKAIDLIDEAS ATIRVEMNSLPTELDQANRRLMQLEIEEAALKKERDDASKKRLEIIRGEIAELREENNQLKAQWEAEKKEVGNISEKRNE LEHARHELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAKSDDLSLVQESVTEEQIAEVVGRMTGIPITKLVEGERE KLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEY MEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMT SNVGSQYLLDNVGENGEISEETTENVMSQLRAHFKPEFLNRIDDTILFKPLALEDIKNIILKMTSQLAHRLEEMEVELEL SEEVKVWIAENAYEPAYGARPLKRYLTKVIENPLAKLIIGGKIPPKSKVIVRLIDNKVDFDVQSIAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-102 | 42 |
