Gene Information

Name : Py04_1232 (Py04_1232)
Accession : YP_006354881.1
Strain : Pyrococcus sp. ST04
Genome accession: NC_017946
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1235117 - 1236124 bp
Length : 1008 bp
Strand : +
Note : COG0214

DNA sequence :
ATGGATAAGCTAAAGGTGATTATGGAGAAGGGAACGGAGAGGCTAAAGAGAGGATTCGCAAAGATGGTTAAGGGCGGAGT
TATTATGGATGTAACGAACGCCGAACAGGCAAGGATCGCAGAAGAAGCAGGAGCAGTTTCAGTAATGGCCCTTCACAAGG
TTCCTGCCGACATAAGGAAAGCTGGTGGAGTTGCCAGAATGGCCCCAGTTGAGAAGATTCAGGAGATAATGGATGCAGTC
ACGATTCCAGTAATGGCGAAAGTAAGAATAGGACATGAGGCAGAGGCAAGAATCTTAGAGGCCCTCGGAGTTGACATGAT
AGATGAGAGTGAGGTTCTAACACCAGCAGATCCATTCTTCCACATATACAAGAAGAAGTTTACCGTGCCATTCGTCTGTG
GTGCCAGGAACCTTGGAGAGGCCGTTAGAAGAATATGGGAAGGGGCGGCGATGATAAGAACTAAGGGTGAGGCAGGAACA
GGAAATATAATAGAGGCAGTTAGGCACGTTAGATTAGTTAATGAGAACATAAGGCTAATCCAAAGAATGACAGATGAAGA
AATTTATGGAGTTGCAGAAAAGTTTGCAGAGCCCTATTTGAGACTCGCATTTAGTGTCAAGGAGATAAGCGGCCTTCCAA
AGAGAGTTCTAGAAAATGAGCCCATATATGAGGGCTTCACATATAGGGAGATTGTTGAGGGCCTCTATAAAATACTCCTA
GAGATAAAGAAGCTTGGTAGACTACCAGTAGTTAACTTTGCAGCTGGTGGTGTTGCGACACCTGCAGATGCAGCCCTAAT
GATGCAGATGGGAATGGATGGAGTCTTTGTCGGTTCTGGAATATTTAAGAGCTCTAATCCGCCAGCAATGGCGAGGGCAA
TAGTTGAAGCCGTAAACCACTGGGATGAGCCGGATGTCCTGGCAGAGATAAGCAGAGAAATTGGAGAGCCCATGAAAGGG
CAAGATATAGCGGAACTTGAAGTCAGGATGGAAGAGAGAGGAGTTTGA

Protein sequence :
MDKLKVIMEKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHKVPADIRKAGGVARMAPVEKIQEIMDAV
TIPVMAKVRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGT
GNIIEAVRHVRLVNENIRLIQRMTDEEIYGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVEGLYKILL
EIKKLGRLPVVNFAAGGVATPADAALMMQMGMDGVFVGSGIFKSSNPPAMARAIVEAVNHWDEPDVLAEISREIGEPMKG
QDIAELEVRMEERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-62 54
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-63 54
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-62 54