|
Name : lysS1 (Cp258_1943) Accession : YP_006353498.1 Strain : Corynebacterium pseudotuberculosis 258 Genome accession: NC_017945 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2092446 - 2095697 bp Length : 3252 bp Strand : + Note : - DNA sequence : ATGTTGCATATTATCGATTGCATGCAGAAACGCTGGGAAACCCGAGTAATCCTCTTTACAGCACAGTTAGCCACTATCTG GCTGATTATTGGACTGATACTAAAACATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTCCTTAATCGGCC TCCCCAACTTCCCCACTCTATTTATCACCATCCTCATGGTGTTGCTCACATCGGGGATGCTGCGCGGACACCGAGGGGCG TTGCTGTTTTATCTTCTGGGATTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGA TCCCGAGATTACCGGTGATAATGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTG TTTGCGGATACCGCGCGCTTAAAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTT GGCCTCATTATCTCGTTTGTTGTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTG GTCTTTCTTCACTGCCATCGGCCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAACCCGCACTTTATCCGGG TTATCGGTGGCATCCTTTCCTCCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAAGCATGATGCAGCA ACGGCTGAGGAACAGCTTCTTACGCGTAAGTTACTGCTTAATCCTCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCG CTATGACCGCAGCTTGATCACCTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCG CTGGTGACCCCCTCGGCGATCCAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGG GTTCTCGGTGCTGCTTCTGTCTCAGAAGCTGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGA TGAGGCAGTAGTAGACGCAGAGAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAG CTGGCTATACCGTCCGGGTGCAGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCT TGGCGACGCGGCGACGAACGCGGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGT AACCGCCCACGATGCTGACGATAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACG TTATGCGCCGTAATCCTGATGCCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTT GGAATATCCAAGTTTTCCCTAAACTTTGTTACCTTCCGCGAAGCTCTCGATCGCGGTACCTATGTAGCGGCTTCCCTGAG GGAGCGGCTGCTGCTCAAACTGCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGT ATCATCCGCAATGGCAGTCGCGCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGC GCCGAGGGTTTCTTGCCTTGGATGAAGGAATATGGGTCTCCTGTGGGCGATCCTCAGGAGATCGCCGCACTTGAATCCGC GGCTCTTATGCCGGCTATCGAGCCGCCAGCTTTATCGGTCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGT CGCTCAGCATGAGCCCCTACCCGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTACTCGCAGCAGATGCGACCCAC ACCGTTTCAGAAACACCGATCTCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTT GGTTGAGGAGCACACAAAGCTCCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCA GCCGCGGTGACCTCATTTCTGCCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGG GATATGGCCGCTAAATCGCTTACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACAT GGACTTTGCGCTTAATAAAAAAGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGC AAGAGCAGGGCTATATGGAAGCCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACT CATATCCGAGCATACGATCAAAACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCAT CCCTCGTGTCTTTGAGATAGGAAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGG AGGCCTACCAGTCTTATGGCAACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTC TACGGGAAGCCAGAGGTGACTACGGCGGACGGACAGGTTCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGA TGCGGTGTCTGAGGCCGTCGGCAAGCATATCTCCCCAAACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACG GCATCACCGCCGCCACCGTGGGTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACC TTCTACGCTGGATTCCCGGTGGAGACTTCGCCACTCACAATGGCAGACCCAGATCAGCCGCGCATCGCCCAGCGTTGGGA CCTTGTAGCCTGCGGGATGGAGCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCG ATCAGTCTCTACGCGCCGCTGGCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGC ATGCCGCCCACAGGCGGCCTAGGAATCGGAATTGATCGCTTGGTCATGTTCCTTACCGGCCAAAACATCCGCGAAGTTCT CTCCTTCCCCTTTGTCAGACCAGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MLHIIDCMQKRWETRVILFTAQLATIWLIIGLILKHININLIRDISFGFSLIGLPNFPTLFITILMVLLTSGMLRGHRGA LLFYLLGFQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIV GLIISFVVMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHNPHFIRVIGGILSSVALFAAIAILFGSRKHDAA TAEEQLLTRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGW VLGAASVSEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEA WRRGDERGFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNL GISKFSLNFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFAS AEGFLPWMKEYGSPVGDPQEIAALESAALMPAIEPPALSVQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATH TVSETPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSW DMAAKSLTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRT HIRAYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAV YGKPEVTTADGQVLDLTGSWPVVPVYDAVSEAVGKHISPNADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPT FYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFG MPPTGGLGIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
