Gene Information

Name : aldA (Cp258_1909)
Accession : YP_006353464.1
Strain : Corynebacterium pseudotuberculosis 258
Genome accession: NC_017945
Putative virulence/resistance : Virulence
Product : Aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2049663 - 2051183 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
GTGACAATTTACGCTAATCCGGGTACTGAAGGCGCAGTTGCTCACTATAAGAAGCGCTATGACAATTACATTGGTGGCCA
GTGGGTGCCGCCTGTTCATGGTGAGTATCTGGATAATGTCACTCCGGTCACTGGGGAAGTCTTCTGCCAGGTGGCTCGCG
GTAAAGCCGAAGATATTGAGAAAGCTCTAGACGCTGCGCATGCTGCCGCAGAGGCATGGGGGAAGACTTCTCCAGCAGAA
CGCGCCCTAATGCTGCACCGGATCGCGGATCGCATGGAGGAACACCTGGAAGAGATTGCTGTGGCAGAGACCTGGGAAAA
CGGCAAGGCTGTGCGTGAGACATTGGCTGCCGACATTCCCCTGGCCATTGATCACTTCCGCTACTTTGCAGGTGCCATTC
GCGCTCAAGAATCGCGGACCTCGCAGATTGATCACAACACGGTCGCTTATCACTTCCATGAGCCAATTGGCGTGGTGGGG
CAGATCATCCCATGGAACTTTCCGCTGTTGATGGCGGCCTGGAAGGTTGCTCCCGCTTTGGCTGCCGGCAATGCGATTGT
GCTTAAGCCGGCTGAGCAAACCCCGGCCTCGATTCTGTACTGGATTGACATCGTGGGCGACCTCATCCCGGATGGCGTGC
TCAATATCGTGAACGGCCTGGGCGAAGAAGCTGGTGTGGCACTCTCCAGCTCTAATCGCATTGGCAAGATCGCTTTTACT
GGTTCGACGCAGGTGGGCAAGCTGATTAACAGGGCTGCTGCAGACAAGATTATTCCTGTCACGCTGGAGCTGGGCGGAAA
ATCACCATCGATTTTCTTTGGTGATGTTATGGACTATGAGGATCCCTTCCGGGATAAATGCGTTGAAGGTCTTGCAATGT
TTGCCCTTAATCAGGGTGAAGTGTGCACCTGCCCCTCGCGCGCACTTGTGCACGAGTCGATTGCGGAGGAATTCCTTGCG
CTAGGTGTGGAGCGAGTACGCAAGATCAAGCTGGGTAATCCACTGGATACTGAGACCATGATGGGTGCACAGGCCTCCAT
GGAGCAAATGGATAAAATTTCCGGTTACTTGGAGATCGGGCCAAAGGAAGGGGCGGAGGTGCTCGCCGGAGGTCATGTGA
ACCGTATCGAGGGGCTGGAAAATGGCTATTACATTGAGCCGACCATTTTCAAGGGCACTAATGACATGCGCATTTTCCAG
GAGGAAATCTTTGGCCCGGTGCTCTCTGTTGCCACGTTTAGTGATTTTGATGAGGCCATCCGAATTGCCAATGATACCAA
CTATGGGCTCGGGGCCGGCGTGTGGACCCGGCATCAGAACACCGCGTATCGCGCGGGACGTGCCATTCAGGCGGGTCGTG
TGTGGGTGAACCAGTATCACAATTACCCAGCTCACGCTGCCTTTGGTGGGTATAAGGAATCCGGAATTGGCCGTGAGACT
CACCTGATGATGCTCGATCATTATCAGCAGACCAAGAATCTGCTCGTTTCTTATGACGAGAATCCCACGGGCTTATTTTA
G

Protein sequence :
MTIYANPGTEGAVAHYKKRYDNYIGGQWVPPVHGEYLDNVTPVTGEVFCQVARGKAEDIEKALDAAHAAAEAWGKTSPAE
RALMLHRIADRMEEHLEEIAVAETWENGKAVRETLAADIPLAIDHFRYFAGAIRAQESRTSQIDHNTVAYHFHEPIGVVG
QIIPWNFPLLMAAWKVAPALAAGNAIVLKPAEQTPASILYWIDIVGDLIPDGVLNIVNGLGEEAGVALSSSNRIGKIAFT
GSTQVGKLINRAAADKIIPVTLELGGKSPSIFFGDVMDYEDPFRDKCVEGLAMFALNQGEVCTCPSRALVHESIAEEFLA
LGVERVRKIKLGNPLDTETMMGAQASMEQMDKISGYLEIGPKEGAEVLAGGHVNRIEGLENGYYIEPTIFKGTNDMRIFQ
EEIFGPVLSVATFSDFDEAIRIANDTNYGLGAGVWTRHQNTAYRAGRAIQAGRVWVNQYHNYPAHAAFGGYKESGIGRET
HLMMLDHYQQTKNLLVSYDENPTGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-143 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-152 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-152 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-152 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_006353464.1 Aldehyde dehydrogenase VFG0082 Protein 2e-143 64