Gene Information

Name : lolD (HFX_2222)
Accession : YP_006349898.1
Strain : Haloferax mediterranei CGMCC 1.2087
Genome accession: NC_017941
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2167222 - 2167971 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGATTCGGTCTCCGAACATCGCCCCCGTTCAGTAGACGACGCAGCGACTGCTCTCCATTGTGAGCGTGTCGTTCG
GGAGTACTCACGCGGTCCCGACTCGCTTTTTTCCCGTGGGTCGGACGCGCCGACGGTTCGTGCCCTCGATGGCGTCTCCC
TGTCGATTTCGACCGGTGAGTTCGTCGCCATCGCCGGCCCGAGCGGCAGCGGCAAGTCGACGTTGTTGCACCTCCTCGCC
GCCCTCGACACGCCGACGCAGGGTGACGTGACCGTCGCCGAAACCGACGTTCGTTCCCTGTCCGCTCGCGGTCGGACGAA
GCTCAGACGCGATACCATCGGCATCGTCTTCCAGCATTTCCACCTGTTGCCCTCGCTTTCGGCTCGCGGCAACGTCGCAC
TCCCGCTTATCGAACGCGGCGTCTCCAAACGAGGGCGTCGCAAGCGCGCCGACGAACTGCTCGAACAGGTCGGACTCGCC
GACCGCGCCGGGCACAAACCGGGCGAACTCTCCGGCGGCGAGCAACAGCGCGTCGCGATTGCACGGGCGCTCGTTTCTGA
CCCCGCGGTTCTCATCGCCGACGAACCGACGGGCGAACTCGACACGGAAACGGGCCAACGCGTCCTCGACTACATCGAAC
AGACGGCCTCTGACCGTGCGGTCGTCGTCGCAACGCACGACGACCACGTCATCGACCGGGCCGACCGCGTCGTTCGCCTC
CGTGACGGTGTTGTGGTGAGCGATGAGTAG

Protein sequence : 
MADSVSEHRPRSVDDAATALHCERVVREYSRGPDSLFSRGSDAPTVRALDGVSLSISTGEFVAIAGPSGSGKSTLLHLLA
ALDTPTQGDVTVAETDVRSLSARGRTKLRRDTIGIVFQHFHLLPSLSARGNVALPLIERGVSKRGRRKRADELLEQVGLA
DRAGHKPGELSGGEQQRVAIARALVSDPAVLIADEPTGELDTETGQRVLDYIEQTASDRAVVVATHDDHVIDRADRVVRL
RDGVVVSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006349898.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-34 50
lolD YP_006349898.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-41 45
lolD YP_006349898.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-34 43