|
Name : serS (HFX_2014) Accession : YP_006349693.1 Strain : Haloferax mediterranei CGMCC 1.2087 Genome accession: NC_017941 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1937687 - 1939069 bp Length : 1383 bp Strand : + Note : - DNA sequence : ATGATTGACAGGCAACTGCTCCGCGACGAACCGGAGCGAGTCCGCGACGCGCTCGCGGCCCGAAACATGGAGGGCGTGGA TGTCGACCACATCATCGACGTGTACGACGAGTGGCGTACGCTGAAAGCCGAGGGAGACGACCTCCGACACGAGCGAAACG AGGTCAGCCAAAAAATCGGCCAGCTAAAGCAGGAGGGCAAAGACGAGGAAGCCCAGGCGGCCATCGACCGCTCGGGTGAA CTCAAAGAAGAACTACAGGAACTCGAAGACCGCGCCGACGAACTCGAAGCGGAACTCGACGAAGCGCTTCTCGAACTCCC CAACATCCCGAACGAGTCGGTCCCGGTCGGTGCAGACGAGTCGGACAACGAGGAGATTCGCCGCGTCGGCTTCGACGACC TGCGCGACCTCCCCGACGAGGTGACGCCGCACTACGACCTCGGCGAGGAACTCGACATCATCGACGAGGCGCGCGCGGCG AAGACGACCGGGTCGGGCTTCTACTTCCTCAAGGGCGAGGGCGCGATGCTCGAACACGCGCTCATCCAGTTCATGCTGGA CGTGCACCGCGAACAGGACTACGTGGACCTCTTCCCGCCGGTTCCGGTCAAGACGACCTCGATGGTCGGCACCGGCCAAC TTCCGAAGTTCGCCGAGGACGCCTATCGCATTGGCGGGTCGGAGACCGAGAACTACGAGGACGACGACCTGTGGCTCTGC CCGACGGCGGAGGTGCCGGTCACGAACATGTACCGCGACGAAATCCTCCTGAAGGACGACCTCCCGCTGAAGCATCAGGC GTACACGCCGAACTTCCGACGCGAGGCTGGCGAACACGGGACCGAAACCCGCGGTATCGTCCGCGTCCACCAGTTCAACA AGGTCGAACTCGTCAACTTCGTCGAACCCGACGAGTCGTACGACCGACTGGAAGCCCTCGTCGACGAGGCGGCAGAAGTG CTCGACCGACTCGGCCTGCCGTACCGCGTGCTCTCGCTCTGTACCGGTGACCTCACCTTCGCGTCGGCGAAGACGTACGA CCTCGAAGTCTGGGCACCGGGCACCGAGTCGGACGACGCTCCGGAACTGGGCGGTCGCTGGCTCGAAGTCTCGTCGGCCT CGAACTTCGAGGACTTCCAGGCGCGCCGAGCCGGGCTTCGCTACCGCCCCGAGCGCCACGAGTCGGCCGAGTATCTCCAC ACGCTCAACGCGTCGGGGACGGCCGTCGGCCGAATCATGGTCGCGCTGCTCGAATACTACCAGAACGAGGACGGCACGGT CGACGTGCCCGAAGTCCTCCAGCCCTACATGGGCGGCCGCGAAGTCATCGAGGGTCACGAGCCGGTCGGTGAATCGGCAG TCGGCGCGGGCAAGAAGGACTGA Protein sequence : MIDRQLLRDEPERVRDALAARNMEGVDVDHIIDVYDEWRTLKAEGDDLRHERNEVSQKIGQLKQEGKDEEAQAAIDRSGE LKEELQELEDRADELEAELDEALLELPNIPNESVPVGADESDNEEIRRVGFDDLRDLPDEVTPHYDLGEELDIIDEARAA KTTGSGFYFLKGEGAMLEHALIQFMLDVHREQDYVDLFPPVPVKTTSMVGTGQLPKFAEDAYRIGGSETENYEDDDLWLC PTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNFVEPDESYDRLEALVDEAAEV LDRLGLPYRVLSLCTGDLTFASAKTYDLEVWAPGTESDDAPELGGRWLEVSSASNFEDFQARRAGLRYRPERHESAEYLH TLNASGTAVGRIMVALLEYYQNEDGTVDVPEVLQPYMGGREVIEGHEPVGESAVGAGKKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-78 | 47 |
