Gene Information

Name : Theba_2552 (Theba_2552)
Accession : YP_006347395.1
Strain : Mesotoga prima MesG1.Ag.4.2
Genome accession: NC_017934
Putative virulence/resistance : Virulence
Product : Retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2772105 - 2773340 bp
Length : 1236 bp
Strand : -
Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain

DNA sequence :
ATGAGGTCGTATGAAATCCCCAAGAAAGTAGTACTGGAAGCATTCAAGAAAGTGAAAGAGAACAGAGGGGCAGAAGGAAT
AGACGAGGTAAGCCTGGAAGAGTTCGAAGCCGATCTTGACAACAATCTCTACAAGATTTGGAATCGAATGACCTCGGGCA
GTTACTTTCCACCTCCAGTAAAAGCTATAGAGATAGAAAAGAAGAGTGGAGGAAAGAGAGTACTGGGAATCCCCACAGTG
GGGGACAGAGTAGCCCAGATGGTAGCCAAAATCTATCTCAATCCCCTGGTAGATCCATACTTCCATAAGGACTCCTACGG
ATACAGGGAGGGAAAGTCAGCGATAGATGCCCTTGAAGTAACGAGGCAGAGATGCTGGCGGTATGACTGGGTACTGGAAT
TCGACATTAAAGGACTGTTCGACAACATAGACCATGAACTACTAATGAGGGCAGTCAAGAAACATGTGAAGATTCCATGG
CTAATACTCTACATAGGGAGATGGCTGAAAGCACCCTTTATGCAAGCGAATGGAAGAGTCGAAGAGAGGAGCAAGGGAAC
GCCACAGGGAGGGGTAATAAGCCCTGTACTGGCTAACCTCTTCATGCATTACGCCTTCGACAAGTGGATGGAGAGAACTC
ATCCGGATAAGCCCTTTGCCAGATACGCAGATGATGGAGTGATACACTGTAGAACTCTGGAGGAAGCCCGGCTTCTTCTT
GAAAGTCTCAAAGAAAGAATGGAAGAATGCAAACTAGAGCTTCATCCAGAGAAGACCCGTATTGTCTACTGCAAAGACGA
TAAAAGGAAGGGCGAGTATCCAAATACAAGCTTTGACTTTCTAGGATACACCTTCAGAGTCCGTAGCTGCAAAGCCAGAA
ACGGGAGGATCTTCTACAGCTTCACCCCTGCAGTGAGTGAACAGGCAAAGAAGGCGATGAGACAGAAGATCCGGAGAATG
AGACTTCAAACCAAGTCATACCTGAGTATTGAAGAACTCTCAGAAAGAATCAACCCGGTAATAAGAGGTTGGATAAACTA
CTATGGACACTTTCGCAGATTTGAGATGTATACAGTACTGAGTCGGCTAAACAAAGCCTTAGTTCAGTGGGTAAGAAACA
AGTACAAGAAAAGGAGAGGTCGTACAAAAGCGGGTAAATGGCTAGAAACTCTTGCTCGCAGGGAGCCTCGTCTATTTGTA
CACTGGACAATGGGGATATTCTATTCGGCTGGATAA

Protein sequence :
MRSYEIPKKVVLEAFKKVKENRGAEGIDEVSLEEFEADLDNNLYKIWNRMTSGSYFPPPVKAIEIEKKSGGKRVLGIPTV
GDRVAQMVAKIYLNPLVDPYFHKDSYGYREGKSAIDALEVTRQRCWRYDWVLEFDIKGLFDNIDHELLMRAVKKHVKIPW
LILYIGRWLKAPFMQANGRVEERSKGTPQGGVISPVLANLFMHYAFDKWMERTHPDKPFARYADDGVIHCRTLEEARLLL
ESLKERMEECKLELHPEKTRIVYCKDDKRKGEYPNTSFDFLGYTFRVRSCKARNGRIFYSFTPAVSEQAKKAMRQKIRRM
RLQTKSYLSIEELSERINPVIRGWINYYGHFRRFEMYTVLSRLNKALVQWVRNKYKKRRGRTKAGKWLETLARREPRLFV
HWTMGIFYSAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 8e-116 53
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 1e-83 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theba_2552 YP_006347395.1 Retron-type reverse transcriptase VFG1512 Protein 7e-84 46