Gene Information

Name : Theba_2013 (Theba_2013)
Accession : YP_006346899.1
Strain : Mesotoga prima MesG1.Ag.4.2
Genome accession: NC_017934
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2151556 - 2153427 bp
Length : 1872 bp
Strand : -
Note : PFAM: CoA binding domain; Polysaccharide biosynthesis protein

DNA sequence :
TTGACAAAACTCAGTGATCTTTCCGGCTTCAAGAGAAATCTTTTGCTTCTAGTAGTTGATTCATTGATAGTATATTTTGC
ATACATACTAGGTATGTACTTCAGATACGGTATTTTCACTCTGGATGAACCGGAGTTTTTCGTTAATGGAATTTATTTCA
GCGCTTTCATTGTCGTTTCTCTTATACTAAACGGTGTATATAGAATCGCCTGGAGTTACAGTTACTTCAGAGATTATTTC
ATAATACTCCGAGCTGTTATCGTTGGCTATGCAATCGGATTTCTTGCAGGTCGATTTCTCAACCTCTTTGAAATAAGATT
TCTCACGGTGCCTTTCACAGTCTCGACGATGGCAGCGATTATCTCCGTTTTTCTCTTAATATGGTCGAGGTTTTTTTGGC
TCAGTATCTTGAGTAGAAATCATCCGATTGTCTCTTCCGAAGAAAGGGTCTTCATAGTAGGGGCAGGAGATGCCGGTACC
TCAATTGCGGAGGAACTGTCGCGCCATCCTGAAAATGGATTGGTAGTGGGTTTTATAGATGACTCTCCGAAAAAGCTTCG
AAAACGAATTCGTGGAATTCCCGTTTTGGGGAATACTGATGAGATTATGCCGCTCGTAGAGAAAATGGGAGTCCGAAAGG
TAATCATTGCAATCCCCTCTGCCGATGCAAGCACATTGAGAAGAATCTTTTCGAAGATCGATGTAAGTAAGGTCAAGGCT
CAGACTCTTCCAAGCATTACGGAGATAATGGACGGAAAGGCGAAACTTGGATATCTGAGAGAGATAAACATCGAAGACCT
GCTTGGAAGAGAAAGCGTTCAGATAGATCTGAACTCACTCAAGGATTATGTTGTTGGAAGAACTGTGCTCATAACCGGTG
CTGGAGGAAGCATTGGGAGTGAGTTGTGCCGTCAGATAGCCCCTCTTGGACCCGGCAGGCTCTTGCTCGCCGGAAAGGGG
GAAAACAGCATCTATGAAATCAGCCAGGAGATTGGCTCTCTGTTTCCTGATCTCAAGGTCAGTCAACTAATTGGCGACGT
GGCCGATCGGTCGAGAATGAGATACATTTTCAATAAGATGAGGCCACAGGTCGTCTTCCATGCCGCTGCCCACAAGCACG
TTCCCATAATGGAAGAGAACCCAACAGAAGCATTTAGAGTCAACTCACTTGGCACTTACAATATTGCAAGTCTGGCCGAT
GAATTTGGAGTCGAAACAATGGTCGTTATTTCGACAGACAAGGCAGTAAGGCCAAGTTCTGTCATGGGTGTTTCAAAGAG
AATCGCAGAGGAATTCGTGAGATCCATTTCATCGAGAAGCAATACGAAATTTGGAATTGTCAGGTTTGGGAACGTTCTTG
GAAGCCGTGGAAGTGTGATACCTCTTTTCAAGAAACAGATCCAGTCCGGTGGGCCCGTTACAGTTACAGATCCCAGAATG
ACAAGATACTTCATGACAATTCCAGAAGCGGTGACGTTAGTTCTTCAAGCGGGGGCATTTTCCGGAGATGGAGACGTCTT
TGTGCTTGACATGGGGGAGCCTGTCAAAATCTCATCCCTCGCAAACGAGATGATTACCCTTGCCGGATATATTCCCCATC
AGGAAATTGAAATAAAGTACACAGGTGTCAGACCGGGCGAGAAGCTCTTCGAAGAATTAGTCCTCACAAATGAAGAATTA
ATTCAGACTAAACATCCAAAGATCTTCCGTCTCAAGATGAATGAAGCGATGGATGAAGAGGCTCTGCTTAAGACAGTTTC
CAGACTGAGGACCGCAGTTGAAGAGAGCGACTTTGAGGAATTGAACAGAATAACTTCTGAAATAGTCGATGATTCAACTG
CCAGAATAGATGATGGATGTGATTCAAAGTGA

Protein sequence :
MTKLSDLSGFKRNLLLLVVDSLIVYFAYILGMYFRYGIFTLDEPEFFVNGIYFSAFIVVSLILNGVYRIAWSYSYFRDYF
IILRAVIVGYAIGFLAGRFLNLFEIRFLTVPFTVSTMAAIISVFLLIWSRFFWLSILSRNHPIVSSEERVFIVGAGDAGT
SIAEELSRHPENGLVVGFIDDSPKKLRKRIRGIPVLGNTDEIMPLVEKMGVRKVIIAIPSADASTLRRIFSKIDVSKVKA
QTLPSITEIMDGKAKLGYLREINIEDLLGRESVQIDLNSLKDYVVGRTVLITGAGGSIGSELCRQIAPLGPGRLLLAGKG
ENSIYEISQEIGSLFPDLKVSQLIGDVADRSRMRYIFNKMRPQVVFHAAAHKHVPIMEENPTEAFRVNSLGTYNIASLAD
EFGVETMVVISTDKAVRPSSVMGVSKRIAEEFVRSISSRSNTKFGIVRFGNVLGSRGSVIPLFKKQIQSGGPVTVTDPRM
TRYFMTIPEAVTLVLQAGAFSGDGDVFVLDMGEPVKISSLANEMITLAGYIPHQEIEIKYTGVRPGEKLFEELVLTNEEL
IQTKHPKIFRLKMNEAMDEEALLKTVSRLRTAVEESDFEELNRITSEIVDDSTARIDDGCDSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-77 42
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 9e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theba_2013 YP_006346899.1 nucleoside-diphosphate sugar epimerase VFG1300 Protein 3e-82 42