Gene Information

Name : Theba_1603 (Theba_1603)
Accession : YP_006346510.1
Strain : Mesotoga prima MesG1.Ag.4.2
Genome accession: NC_017934
Putative virulence/resistance : Virulence
Product : Retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1710880 - 1712115 bp
Length : 1236 bp
Strand : -
Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain

DNA sequence :
ATGAGGTCGTATGAAATCCCCAAGAAAGTAGTACTGGAAGCATTCAAGAAAGTGAAAGAGAACAGAGGGGCAGAAGGAAT
AGACGAGGTAAGCCTGGAAGAGTTCGAAGCCGATCTTGACAACAATCTCTACAAGATTTGGAATCGAATGACCTCGGGCA
GTTACTTTCCACCTCCAGTAAAAGCTATAGAGATAGAAAAGAAGAGTGGAGGAAAGAGAGTACTGGGAATCCCCACAGTG
GGGGACAGAGTAGCCCAGATGGTAGCCAAAATCTATCTAAATCCCCTGGTAGATCCATACTTCCATAAGGACTCCTACGG
ATACAGGGAGGGAAAGTCAGCGATAGATGCCCTTGAAGTAACGAGGCAGAGATGCTGGCGGTATGACTGGGTACTGGAAT
TCGACATTAAAGGACTGTTCGACAACATAGACCATGAACTACTAATGAGGGCAGTCAAGAAACATGTGAAGATTCCATGG
CTAATACTCTACATAGAGAGATGGCTGAAAGCACCCTTTATACAAGCGAATGGAAGAGTCGAAGAGAGGAGCAAGGGAAC
GCCACAGGGAGGAGTAATAAGCCCTGTACTGGCTAACCTCTTCATGCATTACGCCTTCGACAAGTGGATGGAGAGAACTC
ATCCGGATAAGCCCTTTGCCAGATACGCAGATGATGGAGTGATACACTGTAGAACTCTGGAGGAAGCCCGGCTTCTTCTT
GAAAGTCTCAAAGAAAGAATGGAAGAATGCAAACTAAAGCTTCATCCAGAGAAGACCCGTATTGTCTACTGCAAAGACGA
TAAAAGGAAGGGCGAGTATCCAAATACAAGCTTTGACTTTCTAGGATACACCTTCAGAGTCCGTAGCTGCAAAGCCAGAA
ACGGGAGGATCTTCTACAGCTTCACCCCTGCAGTGAGTGAACAGGCAAAGAAGGCGATGAGACAGAAGATCCGGAGAATG
AGACTTCAAACCAAGTCATACCTGAGTATTGAAGAACTCTCAGAAAGAATCAACCCGGTAATAAGAGGTTGGATAAACTA
CTATGGACACTTTCGCAGATTTGAGATGTATACAGTACTGAGTCAACTTAACAAAGCCTTAGTTCAGTGGGTAAGAAACA
AGTACAAGAAAAGGAGAGGTCGTACAAAAGCGGGTAAATGGCTAGAAACTCTTGCTCGCAGGGAGCCTCGTCTATTTGTA
CACTGGACAATGGGGATATTCTATACGGCTGGATAA

Protein sequence :
MRSYEIPKKVVLEAFKKVKENRGAEGIDEVSLEEFEADLDNNLYKIWNRMTSGSYFPPPVKAIEIEKKSGGKRVLGIPTV
GDRVAQMVAKIYLNPLVDPYFHKDSYGYREGKSAIDALEVTRQRCWRYDWVLEFDIKGLFDNIDHELLMRAVKKHVKIPW
LILYIERWLKAPFIQANGRVEERSKGTPQGGVISPVLANLFMHYAFDKWMERTHPDKPFARYADDGVIHCRTLEEARLLL
ESLKERMEECKLKLHPEKTRIVYCKDDKRKGEYPNTSFDFLGYTFRVRSCKARNGRIFYSFTPAVSEQAKKAMRQKIRRM
RLQTKSYLSIEELSERINPVIRGWINYYGHFRRFEMYTVLSQLNKALVQWVRNKYKKRRGRTKAGKWLETLARREPRLFV
HWTMGIFYTAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 2e-116 53
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 8e-84 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theba_1603 YP_006346510.1 Retron-type reverse transcriptase VFG1512 Protein 5e-84 46