Gene Information

Name : dnaB (ES15_0417)
Accession : YP_006341501.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 444881 - 446287 bp
Length : 1407 bp
Strand : +
Note : COG0305;K02314

DNA sequence :
ATGGCAGGAAATAAACCCTTCAACAAACCCACTGAACCTCGTGACCCGCAGGTCGCCGGGCTGAAAATGCCGCCGCATTC
CATGGAGGCGGAACAGTCGGTGTTGGGCGGTTTGATGCTGGATAACGAGCGCTGGGACGATGTGGCCGAGCGTGTCGTGG
CCGAGGATTTTTACACCCGCCAGCACCGCATGATCTTCACCGAAATGCATCGCCTGCAGGAGATGGGCAAACCCATCGAT
TTGATTACGCTTTCTGAATCACTTGAACTTCAGGGACAACTCGAAAGCGTCGGCGGTTTTGCGTATCTTGCGGAGCTGTC
GAAAAACACGCCAAGTGCTGCGAACATCAGCGCTTATGCTGATATCGTGCGCGAACGCGCGGTCGTGCGCGACATGATTT
CCGTCGCCAATGAAATTGCCGACGCCGGTTACGATCCGCAGGGCCGCACCAGTGAAGATCTGCTCGATCTCGCTGAATCG
CGCGTGTTCCAGATAGCCGAAAACCGCGCCAATAAAGACGAAGGCCCGAAGAGTATCGATCAGATCTTAGAAGCCACCGT
CGCGCGTATCGAAACGCTCTATCAGCAGCCGCACGACGGCGTGACGGGCGTGGATACTGGCTATCAGGATCTCAATAAAA
AGACCGCGGGCTTGCAGCGCTCGGATCTCATCATCGTGGCGGCGCGTCCGTCGATGGGTAAAACCACCTTCGCGATGAAC
CTGTGTGAAAACGCCGCGATGCTGCAGGATAAACCGGTGCTGATCTTCTCCCTTGAGATGCCCGGCGAGCAGATCATGAT
GCGTATGCTGGCGTCGCTCTCCCGCGTGGATCAGACGCGTATTCGTACCGGCCAGCTGGATGACGAAGACTGGGCGCGTA
TTTCTGGCACGATGGGCATCCTGCTTGAGAAGCGCAATATGTATATTGACGACTCCTCAGGCCTGACGCCGACGGAAGTG
CGCTCCCGCGCGCGGCGTATTTATCGCGAGCACGGCGGCTTAAGCCTGATTATGATCGACTACTTACAGCTGATGCGCGT
ACCGTCGCTCTCTGATAACCGTACGCTGGAAATCGCTGAGATTTCCCGCTCGCTGAAAGCGCTGGCGAAAGAGCTTCAGG
TACCGGTGGTGGCGCTCTCGCAGCTTAACCGCTCGCTGGAACAGCGCGCCGACAAGCGCCCGGTGAACTCGGATCTGCGT
GAATCCGGCTCTATCGAGCAGGACGCCGACCTTATCATGTTTATCTATCGTGACGAGGTGTATCACGAAAACAGTGACTT
AAAAGGTATCGCGGAGATTATTATCGGTAAGCAGCGTAACGGCCCGATAGGCACGGTGCGCCTGACGTTTAATGGGCAGT
GGTCGCGGTTTGATAACTACGCGGGTCCCCAGTACGACGACGAATAA

Protein sequence :
MAGNKPFNKPTEPRDPQVAGLKMPPHSMEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRQHRMIFTEMHRLQEMGKPID
LITLSESLELQGQLESVGGFAYLAELSKNTPSAANISAYADIVRERAVVRDMISVANEIADAGYDPQGRTSEDLLDLAES
RVFQIAENRANKDEGPKSIDQILEATVARIETLYQQPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMN
LCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEV
RSRARRIYREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLR
ESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-97 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 7e-101 55
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-101 55
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 9e-100 54
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-97 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-86 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-86 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-83 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 4e-77 45