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Name : impC3 (ES15_3845) Accession : YP_006344929.1 Strain : Cronobacter sakazakii ES15 Genome accession: NC_017933 Putative virulence/resistance : Virulence Product : type VI secretion system protein ImpC Function : - COG functional category : - COG ID : - EC number : - Position : 4195124 - 4196623 bp Length : 1500 bp Strand : - Note : COG3517;K11900 DNA sequence : ATGAGCAATCCTTCTCAACAGCAAGAGCTGCAATCGCAGCAGGCGTTCAGCCAGGATGAATTCAGCGCGCTGCTCAGCAA AGAGTTTCGCCCGAAAACCGATCAGGCCCGTTCGGCCGTCGAAAACGCGGTAAAAACCCTGGCCCAGCAGGCGCTGGAAA ACACCGTGACCTTCTCGAACGATACCTACCGCACCATTCAGAACCTGATTGCCGGTATCGACGAAAAACTGTCTCAGCAG GTTAACCAGATTATCCACCACGAGGAGTTCCAGAAGCTGGAAAGCGCCTGGCGTGGCCTGAACTATCTGGTCAACAACAC GGAAACCGACGAGATGCTGAAAATCCGCTTTATGAGCATCTCCAAGCAGGAGCTGGGCCGCACCCTGAAACGCTTTAAGG GCGTGGGCTGGGACCAGAGCCCTATCTTCAAAAAAATCTACGAAGAAGAGTATGGCCAGTTCGGTGGCGAGCCGTTTGGC TGCCTGGTGGGCGACTACTACTTCGACCACAGCCCGCAGGATGTTGAACTGCTGAGCGAAATGGCGCGCATTGGCGCGGC GGCGCACTGCCCGTTCATCACCGGCACCGCGCCAAGCGTGATGCAGATGGAATCCTGGCAGGAGCTGGCGAACCCGCGCG ACCTGACCAAAATTTTCCAGAACACCGAGTACGCTGCCTGGCGCAGCCTGCGCGAATCGGAAGATGCGCGCTATCTGGGC CTCGTCATGCCGCGCTTCCTGTCGCGCCTGCCTTACGGCATCCGCACCAACCCGGTGGACAGCTTCGACTTCGAAGAAGA GACCGACGGCGCGAACCACAGTAACTACAACTGGGCCAACGCGGCCTACGCGATGGCAGCCAACATCAACCGTTCCTTTA AAGAGTACGGCTGGTGCACCTCCATTCGCGGCGTGGAATCGGGCGGCGCGGTAGAAAACCTGCCGTGTCACACCTTCCCG AGCGACGACGGCGGCGTGGACATGAAATGCCCGACCGAAATCGCCATCAGCGACCGTCGCGAAGCGGAACTGGCGAAAAA CGGCTTTATGCCGCTGATCCACCGCAAAAACTCCGACTTCGCCGCCTTTATCGGCGCGCAGTCGCTGCAAAAACCGGCGG AATACCACGACCCGGACGCCACCGCGAACGCCCGTCTGGCAGCCCGCCTGCCATACCTGTTCGCCTGCTGCCGTTTCGCG CACTACCTCAAGTGCATCGTTCGCGACAAGATCGGTTCTTTCCGCGAGCGCGACGAAATGGAACGCTGGCTGAACGACTG GGTGATGAACTATGTGGACGGCGACCCGGCGAACTCCTCTCAGGAAACCAAATCCCGTAAGCCGCTGGCGGCAGCCGAGG TGCAGGTTCAGGAGATCGAGGACAACCCGGGCTACTACGCCGCCAAGTTCTTCCTGCGTCCGCACTACCAGCTGGAAGGC CTGACCGTTTCTCTGCGTCTGGTCTCCAAACTGCCGTCGCTGAAGAGCAACGAGGCGTAA Protein sequence : MSNPSQQQELQSQQAFSQDEFSALLSKEFRPKTDQARSAVENAVKTLAQQALENTVTFSNDTYRTIQNLIAGIDEKLSQQ VNQIIHHEEFQKLESAWRGLNYLVNNTETDEMLKIRFMSISKQELGRTLKRFKGVGWDQSPIFKKIYEEEYGQFGGEPFG CLVGDYYFDHSPQDVELLSEMARIGAAAHCPFITGTAPSVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLG LVMPRFLSRLPYGIRTNPVDSFDFEEETDGANHSNYNWANAAYAMAANINRSFKEYGWCTSIRGVESGGAVENLPCHTFP SDDGGVDMKCPTEIAISDRREAELAKNGFMPLIHRKNSDFAAFIGAQSLQKPAEYHDPDATANARLAARLPYLFACCRFA HYLKCIVRDKIGSFRERDEMERWLNDWVMNYVDGDPANSSQETKSRKPLAAAEVQVQEIEDNPGYYAAKFFLRPHYQLEG LTVSLRLVSKLPSLKSNEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-80 | 41 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| impC3 | YP_006344929.1 | type VI secretion system protein ImpC | VFG2070 | Protein | 3e-177 | 76 |
| impC3 | YP_006344929.1 | type VI secretion system protein ImpC | VFG2093 | Protein | 7e-84 | 42 |
| impC3 | YP_006344929.1 | type VI secretion system protein ImpC | VFG2475 | Protein | 4e-83 | 42 |
