|
Name : gabD (ES15_3576) Accession : YP_006344660.1 Strain : Cronobacter sakazakii ES15 Genome accession: NC_017933 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 3869443 - 3870897 bp Length : 1455 bp Strand : - Note : COG1012;K00135 DNA sequence : ATGACCGCACAAGCATTTGCAGAATATGCGTTTTTCAAAACCGGCTATTTTGTTGACGGGAAATGGCACAGCGCGCAGGA GACCTTCGATGTGCTGAACCCGGCGACGGGCGACGTCATCGCGCAGGTTGCGAAAGCGGGCAAAAAAGAGACCGAGGCCG CTATCGCCGCCGCCAGCCGTGCGTTCCCTGCCTGGCGCGCCAAAACCGCGAAAGAACGTTCTGAAATTCTCTATCGCTGG TATCAGCTCATCATTGAAAACAAGCGCGCGCTTGGCGAGCTGATGACGAGTGAACAGGGCAAGCCGCTGAAAGAAGCCGA AGGCGAAGTGGAATACGCCGCGAGCTTTATTCAGTGGTTCGCCGAACAGGCCAAACGCGCCAACGGGGAAATTATTCCGC CCGTGAAGCCCGGCTCGCGTATTCTGGCGACCCGCGAGCCGGTCGGCGTGGTGGCGGCGATCACGCCCTGGAACTTCCCG ATGGCGATGCTGACCCGCAAGCTTGGCCCGGCGCTCGCCGCGGGCTGCACCGGCGTGATTAAACCCGCTAACAATACGCC GCTCAGCGCCTTCGCGCTGGTGGCGCTGGCGCAACAGGCAGGCGTGCCGGACGGCGTGCTGAACGCGGTGGCGGGCAGTA CATCGGAAATCAGCGACGCCATTATGGCAAGCCCGGATGTCCGTAAAATCTCCTTCACCGGCTCGACCGCGGTTGGCAAA ACGCTGATGCGCAACGCTGCCGAAACGATGAAAAAAGTCTCGATGGAGCTTGGCGGCAACGCGCCGTACATCGTGTTTGA CGATGCCGACATCGACGCGGCGGTCAAAGGCGCGGTCGCCAATAAATTCCGTAACGCAGGCCAGGTGTGCGTCAGCGTTA ACCGTTTTTACATCCAGGAAGGCGTTTATGACCGTTTCGTCAATCAACTGGCGGAGGCGGTAAAAGCGCTGAAAGTGGGC AACGGCATGGAAGACGGCGTGATCGTCGGGCCGCTTATCGAGCAATCGGCGGTCGATAAAGTGCGTGAGCATGTGGAAGA CGCGGTCGCGAAGGGCGCGAAAGTGCTGACCGGCGGCAAACCGCATGCGCTCGGCGGTAATTTCTGGCAGCCGACGGTGC TGATTGATGCGAACGACGATATGAAACTGGCGCAGGAAGAGACGTTCGGCCCGCTGGCGGCCTGCTTTAGCTTTAAAACC GAAGAGGAAGTTATCGCGCGGGCCAACAACACGCCTTATGGCCTCGCCGCTTACTTTTACACTCAGAACCTTCAGCGTGT ATTCCGCGTCTCACAGCAGCTGGAAAGCGGCATGATTGGCGTTAACGAATGTGCCGTTTCGACCGAGGTGGCGCCGTTCG GCGGCGTGAAGGAGTCAGGGCTTGGGCGCGAAGGCTCTGTGCTGGGCCTCGATGAGTTTATGGAAGTGAAAACGCTGCAT CTTGGCGGGTTATAA Protein sequence : MTAQAFAEYAFFKTGYFVDGKWHSAQETFDVLNPATGDVIAQVAKAGKKETEAAIAAASRAFPAWRAKTAKERSEILYRW YQLIIENKRALGELMTSEQGKPLKEAEGEVEYAASFIQWFAEQAKRANGEIIPPVKPGSRILATREPVGVVAAITPWNFP MAMLTRKLGPALAAGCTGVIKPANNTPLSAFALVALAQQAGVPDGVLNAVAGSTSEISDAIMASPDVRKISFTGSTAVGK TLMRNAAETMKKVSMELGGNAPYIVFDDADIDAAVKGAVANKFRNAGQVCVSVNRFYIQEGVYDRFVNQLAEAVKALKVG NGMEDGVIVGPLIEQSAVDKVREHVEDAVAKGAKVLTGGKPHALGGNFWQPTVLIDANDDMKLAQEETFGPLAACFSFKT EEEVIARANNTPYGLAAYFYTQNLQRVFRVSQQLESGMIGVNECAVSTEVAPFGGVKESGLGREGSVLGLDEFMEVKTLH LGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-124 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-80 | 41 |
