Gene Information

Name : basR (ES15_3525)
Accession : YP_006344609.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3819992 - 3820654 bp
Length : 663 bp
Strand : +
Note : COG0745;K07771

DNA sequence : 
ATGAAACTGCTGATAGTCGAAGATGATCTGCTGTTACAGGAAGGACTGGCGCTGGCGCTCGGCAACGAGGGCTATGCGCT
GGATTGCGCCGCGAATGCCGCCGAGGGCGACGCCCTGCTCCAGAGCGGCGAATACAGCCTGATTATTCTCGACTTAGGCT
TGCCGGATAAAGACGGCGCCACGCTGCTCAGCCAGTGGCGCCGGAGCGGTGTGACAACGCCAGTGCTTATTCTCACGGCG
CGTGACGCGCTGGCAGATCGCGTCAGCGGGCTTGATGCGGGTGCGGATGATTATCTGGTTAAACCCTTTGCGCTGGCGGA
GCTTCACGCCCGCGCGCGGGCGCTTATCCGCCGTTATCAGGGGCACAGCGATAATCTGTTGCAGCACGACGATATCACAC
TCAATCTGCAAACCCAGCAGGTACTGCTCCAGGGAATGCCTGTAGAAGTGACGCCCAAAGAGTTTGCGTTACTCACCCGC
CTGATGATGCGCATCGGCCAGACGGTGCACCGCGAAACCCTGCAACAGGACATCTACAGCTGGCAGGACGATCCCAGCTC
GAATACGCTTGAAGTGCACATCCACAATCTGCGCCGTAAGCTCGGTAAAACCCGCATTCGTACCATACGCGGCGTGGGCT
ACCGGCTGGAGCGGCCATCATGA

Protein sequence : 
MKLLIVEDDLLLQEGLALALGNEGYALDCAANAAEGDALLQSGEYSLIILDLGLPDKDGATLLSQWRRSGVTTPVLILTA
RDALADRVSGLDAGADDYLVKPFALAELHARARALIRRYQGHSDNLLQHDDITLNLQTQQVLLQGMPVEVTPKEFALLTR
LMMRIGQTVHRETLQQDIYSWQDDPSSNTLEVHIHNLRRKLGKTRIRTIRGVGYRLERPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-24 45
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006344609.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 1e-46 69
basR YP_006344609.1 DNA-binding transcriptional regulator BasR BAC0197 Protein 2e-19 44
basR YP_006344609.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 3e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006344609.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 3e-39 57
basR YP_006344609.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 3e-18 42