Gene Information

Name : ES15_3413 (ES15_3413)
Accession : YP_006344497.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3700642 - 3701391 bp
Length : 750 bp
Strand : -
Note : IS911 ORF2

DNA sequence :
GTGTTACGTAGTCAGGTTCTGGAGCTGCATAACATCAGCCATGGCTCTGCTGGCGCAAGAAGTATCGCGATTATGGCAAC
CCTGAGAGGCTTCAGAATGGGACGCTGGCTTGCCGGCAGGCTCATGAAAGAACTGGGGCTGGTGAGTTGTCAGCAGCCTA
CCCACCGGTATAAACGTGGTGGTCATGAGCACATCGTTATCCCGAATCGCCTTGAGCGACAGTTCGCAGTGACAGAACCT
AACCAGGTGTGGTGCGGCGATGTGACGTATATCTGGACAGGCAAGCGTTGGGCTTACCTCGCTGTGGTTCTCGATCTGTT
CGCAAGGAAACCGGTGGGCTGGGCAATGTCATTCTCGCCGGACAGCAAGCTGACCATGAAAGCGCTGGAAATGGCGTGGG
AAGCTCGCGGTAAACCAGCCGGAGTGATGTTCCACAGTGACCAGGGTAGTCACTATACAAGCAGGCAGTTCCGACAGTTA
CTGTGGCGTTGCCGGATCAGGCAGAGTATGAGCCGACGTGGAAACTGTTGGGACAACAGCCCAATGGAACGCTTCTTCAG
AAGTCTGAAAAACGAGTGGGTGCCAGTGACAGGTTATATAAACTTTAGCGAAGCTGCTCATGCGATCACAGACTATATCG
TCGGCTATTACAGCTCGCTAAGGCCGCATGACTATAACGGTGGATTACCCCCAAACGAATCGGAAAACCGATACTGGAAA
AGCTCTAAATCGGTGGCCAGTTTTAGTTGA

Protein sequence :
MLRSQVLELHNISHGSAGARSIAIMATLRGFRMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHIVIPNRLERQFAVTEP
NQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSKLTMKALEMAWEARGKPAGVMFHSDQGSHYTSRQFRQL
LWRCRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPVTGYINFSEAAHAITDYIVGYYSSLRPHDYNGGLPPNESENRYWK
SSKSVASFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-98 89
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-98 89
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 5e-85 68
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-85 68
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-85 68
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 5e-85 68
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 5e-85 68
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 5e-85 68
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 5e-85 68
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-85 68
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-66 63
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-66 63
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-67 62
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-67 62
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-68 62
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-68 62
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-71 62
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 4e-62 58
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-37 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ES15_3413 YP_006344497.1 transposase VFG1484 Protein 5e-99 89
ES15_3413 YP_006344497.1 transposase VFG1122 Protein 3e-85 68
ES15_3413 YP_006344497.1 transposase VFG0785 Protein 9e-68 62