Gene Information

Name : kpsT (ES15_3334)
Accession : YP_006344418.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3616725 - 3617390 bp
Length : 666 bp
Strand : -
Note : COG1134;K09689

DNA sequence : 
ATGATTGCTATCGAAAATCTCACTAAATCGTACCGCACGCCCGCAGGGCGGCATTATGTCTTTAAGGATCTCTCTCTGAC
GCTGCCGTCCGGCAAGAGCGTGGCGCTGATAGGGCGTAACGGGGCGGGGAAATCGACGCTGCTGCGCATGATTGGCGGGA
CGGATAACCCGGACAGCGGGCGAATCGTCTCCAGCGCCACGATCTCCTGGCCGGTCGGGCTGGCAGGGGGTTTTCAGGGC
AGCCTGACCGGGCGTGAAAATGTGAAATTTGTGGCGCGGCTTTACGCGCCTAAAGAAGAAGTCCGCCAAAAAGTCGCGTT
CGTTGAGGAATTCGCCGAGCTTGGAAAGTATTTTGACATGCCGGTGAAGGCCTATTCCTCTGGCATGAAAGCGCGTCTCG
GGTTTGGGCTGAGCATGGCGTTCAAATTTGACTACTACCTGGTGGACGAAGTCACTGCTGTTGGCGACGCAAGTTTTCGT
AAAAAATGCGAAACGCTGTTTGAAGCTCGCCATCAAGAGTCGTGCTTTTTAATGGTGTCGCACAATCTCCACTCACTCAA
ACAGTATTGCGATGCGGCGTTGTTTATAGGTAGAAACGGCCAGGTCATTTTTTTCGATGATGTAGACCAGGCAATAGATG
TGTATGTGAAAGAAGAAAATCTTTGA

Protein sequence : 
MIAIENLTKSYRTPAGRHYVFKDLSLTLPSGKSVALIGRNGAGKSTLLRMIGGTDNPDSGRIVSSATISWPVGLAGGFQG
SLTGRENVKFVARLYAPKEEVRQKVAFVEEFAELGKYFDMPVKAYSSGMKARLGFGLSMAFKFDYYLVDEVTAVGDASFR
KKCETLFEARHQESCFLMVSHNLHSLKQYCDAALFIGRNGQVIFFDDVDQAIDVYVKEENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-75 71
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-75 67
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_006344418.1 polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 7e-76 67
kpsT YP_006344418.1 polysialic acid transport ATP-binding protein KpsT VFG0258 Protein 4e-46 47
kpsT YP_006344418.1 polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 3e-45 46
kpsT YP_006344418.1 polysialic acid transport ATP-binding protein KpsT VFG2563 Protein 1e-41 42