|
Name : kpsC (ES15_3329) Accession : YP_006344413.1 Strain : Cronobacter sakazakii ES15 Genome accession: NC_017933 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein KpsC Function : - COG functional category : - COG ID : - EC number : - Position : 3608861 - 3610897 bp Length : 2037 bp Strand : + Note : COG3563 DNA sequence : ATGAAAAATAGCGTCACCGGCATTTTCTCGAAAGGCATCTGGCGTATTGCGGGCTTACATCACCTGCTGCCGATGCCTTG TCGAAAACTCGCGCCGCGTCGGGCTATCCCGGACGATGTTACCGCTATCGCCGTCTGGGGGCGTCGTCCCAGCGCGGCGG CAGCTGTTGCCCGCGCCCGCAAAGCCGGGCTTACGGTGATTCGCCTTGAAGACGGGTTTATCCGCTCTTGCGGCCCGGCG GCGCACGGCTATCCGACGCTCTCGCTGGTTATCGATTACGACGGCATTTACTACGACGCCAGCCAGCCGAGCACGCTGGA GAACCTGATTCAGGACACTGCGGGCAACGCGGCGCTGCGCGAAGCGGCGCAGGAGGCGATGCGCCTTATCGTGGAAGGCG ATCTGGCGAAGTATAACCACGCGCCGCCGTTTGACGGCTCGCCCGATGCCCGCGCGGTGCTGGTGGTGGATCAGACGGCA GGCGATATGTCTGTCACCTTCGGCAATGCCAGCGCGGCATCTTTTCGGCTGATGCTGGAGAGCGCCCTTGCTGAAAACCC GGATGCCGAAATCTGGGTAAAAACGCATCCTGATGTCGTGCACGGCGGCAAGCGTGGCTATTTGCGCGATATCCGCGCGA ATACGCGCCTGCGGCTGATAACCGAAGACGCCAGCCCGCAGTCGCTGCTGCGGTGCGTATCTCGGGTTTATACCGTGACG TCTCACTTCGGTTTTGAAGCGCTGATGGCGGGCAAGCCGGTGGTCTGCTTCGGGCAGCCGTGGTATGCCGGATGGGGGCT GACGGACGACAGGCATCCGGCGGCGGCCACGCTTGCTGCACGGCGCGGCAATGCCTCGCTGCTCACGCTTTTCAGCGCCG CCTATTTGCGTTACGCACGCTACCTTAACCCGCAAACCAATCAGCCCGGCACGCTGTTTGATGTGCTGACGTGGCTGGCG CTGCAGCGGCGTCATCATCTGGCGCTGCGCGGCACGTTATGGGTACCAGGGCTGACGCTCTGGAAGCGCAGCGTCGTAAA ACCTTTTCTTTCAACACCCTATAACCGACTACGCTTTACGCGCCGCGCGCCGCAGGCAGATGCCTGCGTGGTGTGGGGAA CCGCGGGTGAAGCGCGCTGGCAATCAACGACACAGGCGCGTGGCATGCCCGTGTGGCGAATGGAAGATGCGTTTTTGCGC TCGGTGGGGCTCGGCTCCGATCTGTTCGCCCCGCTCTCGCTGGTGCTCGATAAACGCGGTCTCTATTACGACGCCACGCG CGCAAGCGATCTGGAAATAGCCCTGAACCGGGTGCATCTGACGCCAGCCGAAGAAGCGCGCGCCGCAGCACTGCGTCGAC AGATTATCGAAAGCCGGGTCAGTAAATACAACGCGGGCGGCGCGTGGCGACTGCCTGCATCGGCATGGGGACGGCGTATT CTGCTGGTGCCAGGGCAGGTCAGCGACGATGCCTCGCTTGTCGACGGCACGCAAGGCATCCGCACGATTGCCGCGCTCCT GCGCATGGTGCGCGCCAGAAATCCCCAGGCGTATATCGTCTTCAAGCCGCACCCGGACGTGGCCTGCGGCAACCGCCAGG GCGAACCCAGCGCGCGAGACGCGCTGCGCTGGGCGGATTGTCTCGCCACGCAGGCGGATATCGTCGATGTGCTCGATCAG GTAGACGAAGTGCATACGCTGACGTCGCTTGCCGGTTTTGAGGCGCTGCTGCGTGGCAAGACGGTCTTCTGCTACGGTAT GCCGTTTTACGCCGGCTGGGGCCTGACACACGACGAATATCCTTGCCCGCGCCGCACCCGGCGGCTCACGCTTAACGCGC TTATCCACACCACGCTCATCGATTACCCCTTCTACCGCCACCCAACGCGCAAAACGCCGATCGCTGCGGAGGAAGCGGTT GCCCTGCTCAGCGCATCGCCCCGACGCAACGTCACGCACCACCGCCGCCGTAAAACAATCACCCGGCTCGCCAATAAAGC CCGCAATCTCTTTCACGCGCTTTTTTATTCCCGGTGA Protein sequence : MKNSVTGIFSKGIWRIAGLHHLLPMPCRKLAPRRAIPDDVTAIAVWGRRPSAAAAVARARKAGLTVIRLEDGFIRSCGPA AHGYPTLSLVIDYDGIYYDASQPSTLENLIQDTAGNAALREAAQEAMRLIVEGDLAKYNHAPPFDGSPDARAVLVVDQTA GDMSVTFGNASAASFRLMLESALAENPDAEIWVKTHPDVVHGGKRGYLRDIRANTRLRLITEDASPQSLLRCVSRVYTVT SHFGFEALMAGKPVVCFGQPWYAGWGLTDDRHPAAATLAARRGNASLLTLFSAAYLRYARYLNPQTNQPGTLFDVLTWLA LQRRHHLALRGTLWVPGLTLWKRSVVKPFLSTPYNRLRFTRRAPQADACVVWGTAGEARWQSTTQARGMPVWRMEDAFLR SVGLGSDLFAPLSLVLDKRGLYYDATRASDLEIALNRVHLTPAEEARAAALRRQIIESRVSKYNAGGAWRLPASAWGRRI LLVPGQVSDDASLVDGTQGIRTIAALLRMVRARNPQAYIVFKPHPDVACGNRQGEPSARDALRWADCLATQADIVDVLDQ VDEVHTLTSLAGFEALLRGKTVFCYGMPFYAGWGLTHDEYPCPRRTRRLTLNALIHTTLIDYPFYRHPTRKTPIAAEEAV ALLSASPRRNVTHHRRRKTITRLANKARNLFHALFYSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 1e-170 | 61 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 9e-171 | 61 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 4e-123 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_006344413.1 | capsule polysaccharide export protein KpsC | VFG0259 | Protein | 2e-123 | 48 |
| kpsC | YP_006344413.1 | capsule polysaccharide export protein KpsC | VFG0704 | Protein | 2e-106 | 46 |
| kpsC | YP_006344413.1 | capsule polysaccharide export protein KpsC | VFG0692 | Protein | 2e-114 | 45 |
