Gene Information

Name : kpsD (ES15_3328)
Accession : YP_006344412.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : polysialic acid transport protein KpsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3607192 - 3608856 bp
Length : 1665 bp
Strand : +
Note : COG1596

DNA sequence : 
ATGAAAAACGTTTCATCCGCCTCACTGATCTTTTTCTGTTTATCGGCCTGCGCCAGCGCGCTTGATCTCACCGCCGACCC
GGCGCTGACCGGCGCGGCGCCCATTCTGTCATCGTCGTCATCGGCTCCGGTCAGCGCAGATGGCTTTGATAACACGCCGC
CGCCCGCGCCCGCCACGGTCATGAGCCGCATGTTCGGCGCACAGCTTTTTACCGCCCAAAACGCGGAAGGCGGGGCTGGC
ATCGCCTTCAACCCCAATTATGTGATTGGTCTTGGCGACACCATTCAGGTGCGTCTGTGGGGCGCTTTCACGTATGACGG
CACATTAACCGTCGACCCGAAAGGCAACATCTTTCTGCCTAACGTCGGCCCGCTTAAAGTTGCAGGTGTGACGAATAGCC
AGCTCAACGCACTGGTTATCTCGCGAGTGAAAGAGGTGTACCAGGCGAATGTGAATGTCTACGCCTCGCTGGTTCAGGCG
CAGCCGGTGAAAGTGTTTGTCACGGGCTATGTCCGCACGCCGGGGTTATATGGCGGCGTGGCGTCCGACTCGCTGCTTTC
GTATCTCAGCAAAGCGGGCGGCGTGGACAGCGAGCGCGGCAGTTATGTCGATATCACCGTCAAACGCGGCCAGAAAACGC
GCTCGCATGTGAACCTGTATGATTTTCTGCTCAACGGCAGCCTCAGCCTGTCGCAGTTCGCCGATGGCGACACCATTATC
GTCGGTCCACGCCAGCACACCTTTGGCGTCGAAGGCGATGTCTTTAACAGCTACGACTTTGAATTTACCGATGAGCGTAT
TCCGGTTTCCGAAGCGCTGCGCTGGGCGCGGCCTAAACCGGGGGCCACGCATGTGACGCTGATGCGCCAGCAAGGCGCGA
TGAAGCAGAGCGAATATTTCCCGATTAGCGAAACCGCAGGCCGCATGTTGCAGGATGGCGATCGCATGGTGGTCAGCTCC
GATCGCTATACCGGCACCATCCAGGTACGCGTGGAAGGCGCACACTCCGGCGAACATGCGATGGTATTGCCTTACGGTGC
CACGCTGCGCCAGGTGATGGCGAAACTGCGCCCGAACACGATGTCGCAGTTAAACGCCATCAAACTCTATCGCCGCTCGG
TCGCGCTGCGTCAGAAAGAGATGCTGGATCTGTCGCTGCAAAAGCTGGAGCAGGCTTCGCTCTCAGCGCAATCCTCTACA
CAGGAGGAATCGCGCCTGCGTATGCAGGAGGCGCAACTGGTCAGCCGCTTCGTGGCGAAGGCCCGTACCGTGGTGCCGCA
GGGCGAAGTGGTACTGAATGAGAACAACCTTGATTCCGTGCTGCTGGAAGATGGCGACGTTATCACCATCCCGGAGAAAA
CGTCGCTCGTCATGGTGCATGGCGAGGTGCTGTTCCCCAACGCCGTCACCTGGGAGAAAGGGCTGGAGCCTGAGGATTAC
ATCGCCAAATGCGGCGGTATGACGCAAAAAGCCAGCGGTGCGAAAGTTATCGTGATTCGCCAGAACGGCGAGGCGCTCAA
TGCCGAAGATGTCGATGACATGCAGCCGGGCGATGAACTGATGGTGCTGCCGAAGTATGAGTCGAAGAATATTGAAGTGA
CGCGCGGCATTTCAACCATCATGTACCAGCTGGCTGTCGCAGCGAAAGTCATCCTGACGCTGTAA

Protein sequence : 
MKNVSSASLIFFCLSACASALDLTADPALTGAAPILSSSSSAPVSADGFDNTPPPAPATVMSRMFGAQLFTAQNAEGGAG
IAFNPNYVIGLGDTIQVRLWGAFTYDGTLTVDPKGNIFLPNVGPLKVAGVTNSQLNALVISRVKEVYQANVNVYASLVQA
QPVKVFVTGYVRTPGLYGGVASDSLLSYLSKAGGVDSERGSYVDITVKRGQKTRSHVNLYDFLLNGSLSLSQFADGDTII
VGPRQHTFGVEGDVFNSYDFEFTDERIPVSEALRWARPKPGATHVTLMRQQGAMKQSEYFPISETAGRMLQDGDRMVVSS
DRYTGTIQVRVEGAHSGEHAMVLPYGATLRQVMAKLRPNTMSQLNAIKLYRRSVALRQKEMLDLSLQKLEQASLSAQSST
QEESRLRMQEAQLVSRFVAKARTVVPQGEVVLNENNLDSVLLEDGDVITIPEKTSLVMVHGEVLFPNAVTWEKGLEPEDY
IAKCGGMTQKASGAKVIVIRQNGEALNAEDVDDMQPGDELMVLPKYESKNIEVTRGISTIMYQLAVAAKVILTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsD YP_854331.1 polysialic acid transport protein KpsD precursor Not tested PAI I APEC-O1 Protein 0.0 77
kpsD AAZ04468.1 polysialic acid transport protein precursor Virulence PAI I APEC-O1 Protein 0.0 77
kpsD CAE85212.1 KpsD protein Virulence PAI V 536 Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsD YP_006344412.1 polysialic acid transport protein KpsD VFG1448 Protein 0.0 77