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Name : ldcC (ES15_3144) Accession : YP_006344228.1 Strain : Cronobacter sakazakii ES15 Genome accession: NC_017933 Putative virulence/resistance : Virulence Product : lysine decarboxylase LdcC Function : - COG functional category : - COG ID : - EC number : - Position : 3385574 - 3387712 bp Length : 2139 bp Strand : - Note : COG1982;K01582 DNA sequence : GTGAATATCATCGCCATCATGGGGCCGCACGGCGTTTTTTATAAAGACGAGCCGATGAAAGAGTTGCAGGCGGCGCTCCA GCAGCAGGGCTTTCAGCTAATCTGGCCGAAAAACAGCAACGATCTGCTGAAGTTTATCGAGCACAACCCACGCATCTGTG GCGTCATTTTCGACTGGGATGAGTACAGTCTCGATTTATGCTGTGAAATCAATCAGCTCAATGAATATCTGCCGCTTTAT GCGTTTATCAATACGCACTCGACGCTGGATGTCAGCGCCAACGAGATGCGCATGGCGCTCTGGTTTTTCGAGTATTCGCT GGGCATTGCCGACGACATCGCGACGCGCATTCGCCAGTACACCCAGGAGTATCTCGACAACATCACGCCGCCGTTTACCA AAGCGCTGTTTACTTATGTGAAAGAGGGTAAATATACGTTCTGCACGCCAGGGCATATGGGCGGCACGGCGTATCAGAAA AGCCCGGTCGGCTGCCTGTTTTACGATTTTTTTGGCGGCAACACGCTGAAGGCGGATGTTTCGATCTCCGTCACCGAGCT TGGATCGCTGCTCGATCACACCGGGCCGCATCTGGAGGCGGAAGAGTATATCGCCCGCACTTTCGGGGCCGAGCAAAGTT ATATGGTGACCAACGGCACATCCACGTCGAATAAAATCATCGGGATGTACGCCGCGCACGCCGGCAGCACGGTGCTTATC GATCGCAACTGCCATAAGTCGCTGACGCATCTGCTGATGATGAGCGATATTGTGCCGCTGTGGCTCAAGCCCACGCGTAA TGCGCTCGGTATTCTGGGCGGCATTCCAAAGCGGGAATTTACCCGTGAGTCGATCGCCCAAAAAGTGGCGCAGACGCCGG ACGCCAGCTGGCCGGTTCATGCGGTTATCACCAATTCCACCTACGACGGGCTGCTGTATAACACCAACTGGATCAAGCAG ACGCTGGACGTTCCCTCGATCCATTTCGATTCCGCCTGGGTGCCCTACACCCATTTTCACCCGATCTACAAAGGCAAGAG CGGCATGAGCGGCGAGCGCGTGCCCGGTAAAGTGTTCTTCGAAACCCAGTCGACCCACAAAATGCTGGCGGCGCTGTCGC AGGCGTCGCTTATCCACATTAAAGGCGACTATGACGAAGAGACGTTCAACGAAGCGTACATGATGCACACCACCACCTCG CCGAGTTATCCGCTGGTGGCGTCGATTGAAACCGCCGCGGCGATGCTGCGCGGCAATCCGGGCCGTCGCTTAATCAACCG CTCGGTGGAGCGCGCGCTGCATTTTCGCAAAGAGGTACAGCGTCTTCGCGAGGAGAGTGACAGCTGGTTCTTTGATATCT GGCAGCCAGAGGAGATTGACGAAGCGGACTGCTGGCCGATTACGCCCGGCGACGACTGGCACGGTTTTACCCATGCCGAC CGCGATCATATGTATCTCGATCCGGTGAAGGTGACGATCCTGACGCCGGGCATGGACGCGCAGGGCAATATGGAGAAAGA GGGGATCCCCGCGGCGCTGGTCGCGAAGTTTCTTGACGAGCGCGGCGTGGTGGTGGAGAAAACCGGGCCGTACAACTTGT TGTTCCTGTTTAGTATCGGCATCGATAAAACCCGCGCGATGGGCCTGCTGCGCGGCCTGACGGAGTTTAAGCGCGCCTAC GATCTCAACCTGCGGGTGAAAAACATGCTGCCCGATCTCTGGGCGGAAGATCCCGATTTCTACCGCAATATGCGCGTGCA GGAGCTGGCGCAGGGGATCCACAAGCTTATCCAGCAGCACGATCTGCCGGATCTGATGCTGCGGGCGTTTGACGTGCTGC CGGAAATGAAAATGACGCCGCATGAAATGTATCAGCAGCAGGTGAAGGGCAATGTCGAAACGGTGGAGATCGAAAAGCTG ATCGGGCGGGTGTCTGCCAATATGATCCTGCCGTATCCGCCTGGCGTGCCGCTGGTGATGCCTGGCGAGATGATTACCGA AGATTCGCGCGCGGTGCTCGATTTCCTGCTTATGCTCTGCTCCATCGGCAGGCACTATCCCGGTTTTGAAACGGATATCC ACGGCGCGAAGTGCGGCGAAGATGGCGTCTATAGGGTACGTGTCCTAAAAAGCGAGTAA Protein sequence : MNIIAIMGPHGVFYKDEPMKELQAALQQQGFQLIWPKNSNDLLKFIEHNPRICGVIFDWDEYSLDLCCEINQLNEYLPLY AFINTHSTLDVSANEMRMALWFFEYSLGIADDIATRIRQYTQEYLDNITPPFTKALFTYVKEGKYTFCTPGHMGGTAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIIGMYAAHAGSTVLI DRNCHKSLTHLLMMSDIVPLWLKPTRNALGILGGIPKREFTRESIAQKVAQTPDASWPVHAVITNSTYDGLLYNTNWIKQ TLDVPSIHFDSAWVPYTHFHPIYKGKSGMSGERVPGKVFFETQSTHKMLAALSQASLIHIKGDYDEETFNEAYMMHTTTS PSYPLVASIETAAAMLRGNPGRRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEIDEADCWPITPGDDWHGFTHAD RDHMYLDPVKVTILTPGMDAQGNMEKEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY DLNLRVKNMLPDLWAEDPDFYRNMRVQELAQGIHKLIQQHDLPDLMLRAFDVLPEMKMTPHEMYQQQVKGNVETVEIEKL IGRVSANMILPYPPGVPLVMPGEMITEDSRAVLDFLLMLCSIGRHYPGFETDIHGAKCGEDGVYRVRVLKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 70 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldcC | YP_006344228.1 | lysine decarboxylase LdcC | VFG1670 | Protein | 0.0 | 64 |
