Gene Information

Name : ribD (ES15_2971)
Accession : YP_006344055.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3201288 - 3202391 bp
Length : 1104 bp
Strand : -
Note : COG1985;K11752

DNA sequence :
ATGTCTGACGAATTTTACATGGCGCGCGCGCTTAAGCTCGCGGGCCAGGGACGTTTTACTACGCATCCGAATCCGCGCGT
GGGCTGCGTGATTGTTAAAGAGGGCGTAATCGTCGGCGAAGGCTTTCATCTGCGCGCTGGCGAGCCGCACGCCGAAGTGC
ATGCGCTGCGTATGGCGGGCGACAAGGCGCGCGGTGCCACTGCGTATGTCACGCTTGAACCCTGTAGCCACCACGGACGC
ACGCCGCCGTGCTGCGATGCGCTGATTAACGCGGGCGTCGCGCGTGTTGTCGCGGCGATGCAGGATCCGAACCCACAGGT
GGCGGGCCGCGGTTTGTATCGTCTTCAGCAGGCGGGAATTGAGGTCAGCCACGGTCTGATGATGAGCGAGGCCGAAGCGC
TCAATAAAGGCTTTCTCAAGCGCATGCGCACCGGTTTTCCGTTTATTCAGCTCAAGCTCGGCGCGTCGCTTGACGGCCGC
ACGGCGATGGCGAGCGGCGAAAGTCAGTGGATAACCTCGCCGCAGGCCCGGCGCGACGTGCAGCGTCTGCGCGCCGAAAG
CCATGCTATCCTCACTACCAGCGCCACGGTGCTGGCCGACGATCCGTCAATGACGGTGCGCTGGGATGAACTCGGCGAAG
AAACGCAGGCGGTTTATCCGCGTGAAAACCTGCGCCAGCCGCTGCGGATCGTGCTCGATCGTCAGAATCAGGTGACGCCC
GCGCACAAGATTGTCAATCAGCCCGGCGAGATATGGCTTGCCCGCGCCTGCCCGGACGACACCGTCTGGCCAGAGGGCGT
GGAACAATTGCCGACGCCCGTGCATAACGGCAAGCTCGATCTGGTATTGCTGATGATGCAGCTTGGCAAACGCCAGGTGA
ACAGCCTGTGGGTTGAAGCGGGCCCGCAGCTCGCCGGTGCGCTCCTGCAGGCGGGGCTGGTGGATGAGCTGATTGTTTAT
ATGGCGCCGAAACTGCTCGGCAGCGAGGCCCGCGGGCTATTTGCGCTGCCAGGCCTTGAGCGGCTCGCCGACGCGCCGCG
CCTGGAATTTCGCGATGCCGTTCAGGTCGGCCCCGATTTGCGCCTGCGCCTGACGCTCGTCTGA

Protein sequence :
MSDEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMAGDKARGATAYVTLEPCSHHGR
TPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGR
TAMASGESQWITSPQARRDVQRLRAESHAILTTSATVLADDPSMTVRWDELGEETQAVYPRENLRQPLRIVLDRQNQVTP
AHKIVNQPGEIWLARACPDDTVWPEGVEQLPTPVHNGKLDLVLLMMQLGKRQVNSLWVEAGPQLAGALLQAGLVDELIVY
MAPKLLGSEARGLFALPGLERLADAPRLEFRDAVQVGPDLRLRLTLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-50 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-50 48