Gene Information

Name : clpB2 (ES15_2825)
Accession : YP_006343909.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : Clp ATPase chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3041099 - 3043792 bp
Length : 2694 bp
Strand : -
Note : COG0542;K11907

DNA sequence :
GTGGCTATCTCAAGGAAGAATCTTTTTTCAAAGCTGGGTGACACGCTCTTCAGAAGTATTGAAAGCGCAACGACGCTCTG
TAAGTTACGCGGTAATCCTTATGTGGAGCTGGTCCATTGGATTAATCAGCTCTGGCACCAGGAAGATAACGATCTCAAGC
ATGTCGCACGTTATTTCAATGTTGACTGCGAATCCCTGGATCGTGAGTTAGCGCGTTCTCTTAATCATTTACCTGATGGC
GCAACAGCGGTCGCAGATTTTTCTTATCTTATTGAGCTGGCGATTGAACGGGCCTGGATGTATACCAGTCTTGAGCATTC
TGAAAGTAAAATACGTAGCGGACATCTTTTAATAGCGTTGCTGACGTCTGTAGAACTTCGCCGTGCTTTATTAGCGATTG
CTGCGCCACTGGAGAAAATTGTACTCGAGCAATTCAATCGCGATTTCAACTATATCACCCGCAATTCACCTGAAGTAAAA
GAGAGCGAATCGACGGTATTTCTTAGCAGCCAGAATGCTATGCCGGGTGAAGCCAGCGGCGCTATCAAATTACAAGGCAG
TGGCAGCCTTGCTCAATATGCAACCGACCTCACCGCGCTTGCCAGAGAAGGAAAGATTGACCCTGTGCTGGGCCGCGATC
GCGAAATCAGCACAATGATCGATATCCTTCTGCGTCGCCGTCAAAACAATCCCTTACTGACCGGAGACGCTGGCGTTGGC
AAAACGGCTGTCGTCGAAGGGCTGGCGCTCGCCATTAGCGCAGGTGAAGTGCCTCCTTCGCTCGCTGAGGTGCGCTTAAT
GAGCCTGGATATCGTGGCGCTTTCTGCAGGGGCCAGTATGAAAGGCGAATTCGAAGCGCGTCTTAAAGCTGTGCTGGAAG
AAGCGGCCTCTTCTGAGCAACCGGTCATTTTATTTATTGATGAGGTACATAATCTGGTCGGCGCGGGAAATACCGCAGGG
ACCGGCGATGCAGCAAATTTACTGAAGCCAGCGTTAGCCCGTGGTCAGTTAAGGACAATCGGAGCAACGACCTGGAGTGA
ATTTAAACGACATATTGAAAAAGATCCTGCGCTGACACGTCGTTTTCAGGTGTTGCAGGTAGAGGAGCCTGATGAGGACA
ATGCCACGGAAATGTTGCGTGGTCTGGTGCCGGTGCTGGAAGCGCATCATAACGTCTGGGTTTTAGAAGAAGCATTACGC
GCAGCCGTAAAACTCTCGCATCGTTATATCCCCGCCAGGCAGTTACCTGACAAAGCGATCAGTTTGCTGGATACGGCCTG
CGTCAGAGTTGCCGTAGGGCAATATGCGCCCCCGCAAATGTTGCAGGATTTAAAATACCAGACGGAATCTGCAAAAAGGC
AGCTTTCGCTGGCCGTTAAAGCCAGTACGCTTGGTAAAGGTAATGAGGCATCTGTTAATGCATTAAAGCGCGTTATCACA
CAGAAGATTAAAGAAGCCGATTCGTTTGAATCGCGTTGGCAGCAGGAAAAAAATATTGTTAGCGAAATTAATGCGCTGCG
AGCCACGCTACAGAATCATTGCCAGCAGGAAAACGTCGATGACGAACAGCAAGCAGCGTTAAAAAAGGCACTTTTACAGG
CAGAGGGTCAGCTTAATCGGGTTCGTGGTGAACAGACGATGATTCACACGGAGGTTAGCGCAAATGTCGTTGCCGCTATT
GTAAGTGAATGGACAGGTGTTCCGATTGGCCAGATGCTTCAGGATGAGATGAATATTGTCCGCGAACTTCCTTTGCATCT
TGCTGAACGTGTCACCGGCCAGCCTTTTGCGCTTAAGCAAATTAGTGAGCGTATTTTAATGGCCCGTGCAGGCCTGGCGG
ATCCTGGCCGTCCGACAGGCGTCTTTATGCTGACGGGGCCGTCCGGGACCGGTAAAACGGAAACCGCGCTGGTCATTGCG
GAAAAAATGTATGGCGGCGAGCATAATCTCATTACTATTAATATGAGTGAGTATCAGGAAGCGCATACCGTATCCGCTTT
AAAAGGATCACCGCCGGGATATATTGGTTATGGTGAAGGAGGCGTTCTTACCGAAGCGGTTCGCCGTAAACCTTATAGCG
TTATTTTGCTGGATGAGATTGAAAAAGCCCATCCTGATGTGCATGAGTTGTTTTTCCAGGTTTTTGATAAAGGACGGATG
GAAGATGGCGAGGGCCGATTAATTGATTTTCGTAATACCATCATCCTGTTAACAAGCAATGTGGGTAGTGAAAAGCTAAT
ATCGTTATCGCGTGATGAAAATACATTACCTGAAGAGAAAAGGCTGGCAGAACTACTGCATACTGAATTATTAAAATTTT
TCCCTGCTGCATTTCTCGGCCGGCTAACGGTAATTCCTTATCTCCCTTTGAGGCGAGAAGCATTAGGATTCATTATAAAT
ACTCAGCTTAAGCGAGTGGCAAAGCGTCTTTATGAAAATCATAAAGTAACGCTTGAATATAGCGATGAAGTGATTAACTA
CATTATTGACCAATGCCACGTATCCGATACCGGTGCGAGAGTGTTAATTCGTTATATCGAGCAGAATATTTTACCCCAGA
TAGGAGGGATTCTTATGAATAACGCCCAAAAAGCGAAGCTTTCAGGCGTGACGATCTCAACGGGAACAGAATGTCTTCTG
GTAGCACCTTATTGCGAGGATGACATAGAAGAAAAAAGCACTACTGTGCAATAA

Protein sequence :
MAISRKNLFSKLGDTLFRSIESATTLCKLRGNPYVELVHWINQLWHQEDNDLKHVARYFNVDCESLDRELARSLNHLPDG
ATAVADFSYLIELAIERAWMYTSLEHSESKIRSGHLLIALLTSVELRRALLAIAAPLEKIVLEQFNRDFNYITRNSPEVK
ESESTVFLSSQNAMPGEASGAIKLQGSGSLAQYATDLTALAREGKIDPVLGRDREISTMIDILLRRRQNNPLLTGDAGVG
KTAVVEGLALAISAGEVPPSLAEVRLMSLDIVALSAGASMKGEFEARLKAVLEEAASSEQPVILFIDEVHNLVGAGNTAG
TGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVEEPDEDNATEMLRGLVPVLEAHHNVWVLEEALR
AAVKLSHRYIPARQLPDKAISLLDTACVRVAVGQYAPPQMLQDLKYQTESAKRQLSLAVKASTLGKGNEASVNALKRVIT
QKIKEADSFESRWQQEKNIVSEINALRATLQNHCQQENVDDEQQAALKKALLQAEGQLNRVRGEQTMIHTEVSANVVAAI
VSEWTGVPIGQMLQDEMNIVRELPLHLAERVTGQPFALKQISERILMARAGLADPGRPTGVFMLTGPSGTGKTETALVIA
EKMYGGEHNLITINMSEYQEAHTVSALKGSPPGYIGYGEGGVLTEAVRRKPYSVILLDEIEKAHPDVHELFFQVFDKGRM
EDGEGRLIDFRNTIILLTSNVGSEKLISLSRDENTLPEEKRLAELLHTELLKFFPAAFLGRLTVIPYLPLRREALGFIIN
TQLKRVAKRLYENHKVTLEYSDEVINYIIDQCHVSDTGARVLIRYIEQNILPQIGGILMNNAQKAKLSGVTISTGTECLL
VAPYCEDDIEEKSTTVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 57
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-127 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-127 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB2 YP_006343909.1 Clp ATPase chaperone protein ClpB VFG2076 Protein 0.0 51
clpB2 YP_006343909.1 Clp ATPase chaperone protein ClpB VFG2084 Protein 3e-140 41