Gene Information

Name : impC2 (ES15_2818)
Accession : YP_006343902.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3034252 - 3035748 bp
Length : 1497 bp
Strand : -
Note : COG3517;K11900

DNA sequence :
ATGACTCACACAGAGCAATCACAGCGCGCCGCGGCGTCTGCCATTGAACCTGATGACTTCAACGCGTTACTCGCTAAGGA
GTTTAAACCGCGTTCGGATCAAACTCGTGCTGCGGTAGAAGGAGCGGTCAAAACCCTTGCGGAGCAGGCACTGGTTAATG
CTGTTACGCTCTCGGATGATGCTTATAAATGCATTGCATCCATCATTGCTGAAATTGACAGAAAGCTTTCAGAGCAAATC
AACCTGATTTTACATCATGAGGAGTTTCAGACGCTGGAAAGCGCCTGGCGCGGTCTGCATTATCTCGTCACTCATACCGA
AACGGACGAAAAGTTAAAATTACGCTTCCTGGATATTTCCAAGAGTGACCTGCGCCGTACGATGAAACGCTATAAAGGCG
TCGCCTGGGATCAAAGCCCGCTGTTTAAAAAAATCTACGAAGAAGAGTATGGGCAACTTGGGGGCGAGCCTTATGGTTGC
CTGGTTGCCGATTATTATTTTGATCACAGCGCACCTGATGTAGATCTGCTGGCTTCACTTGGCAAAGTCGCGGCCTCTGC
GCACGTTCCTTTTATTAGCGGCGCGTCGCCATCTGTTCTGCAGATGGAATCCTGGCAGGAGCTCTCCAACCCTCGCGACC
TGACCAAAATCTTTACGCAGAATCTCGAATACGCCGCCTGGAATTCACTGAGGCTGGCGGAAGATTCTCGCTATATTGGG
CTTGCCATGCCGCGCTTCCTGGCGCGTTTGCCCTATGGTATTCGTACTAATCCGGTAGATGAGTTTCACTTTGAAGAAAC
GACCGACGGGGCGGATCATTCTAAGTATGTCTGGGCTAATGCTGCTTACGCGATGGCCGTTAACATCAATCGCTCATTCA
AAGAATATGGCTGGTGCACATTAATCCGCGGTGTTGAAAGCGGAGGCGTGGTGGAAGGGCTGCCGTGTCATACTTTCCCG
ACCGATGATGGTGGCATTGATATGAAATGCCCGACAGAAATCGCTATTTCTGATCGCCGCGAAGCCGAACTCGCGAAAAA
TGGCTTTATACCGCTGGTGCATCGTAAAAACACCGACTATGCCGCCTTTATCGGCGCACAGTCTTTACAGAAGCCTGCTG
AATATTATGATGCGGACGCTACCGCTAATGCGAACTTATCAGCGCGTTTACCGTATATGTTTGCGTGTTCGCGTTTCGCG
CATTATTTGAAATGCATTGTTCGCGATAAAATCGGCACCTTTAAAGAGCGCGACGATATGCAGCGCTGGCTGAATGACTG
GATCATGAATTATGTCGATGCCGATCCTACTAACTCGTCATTAGAAACCAAGTCTCGCCGCCCGCTCGCGGCTGCCGAGG
TCATTGTGGAAGATGTGGAAGGGAATCCTGGTTATTATCAGGCGAAATTCTTTTTGCGCCCGCATTTTCAGCTGGAAGGA
TTAACGGTGTCGTTAAGAATGGTCGCGAAACTGCCTTCTTTAAAACATGTTGCATAA

Protein sequence :
MTHTEQSQRAAASAIEPDDFNALLAKEFKPRSDQTRAAVEGAVKTLAEQALVNAVTLSDDAYKCIASIIAEIDRKLSEQI
NLILHHEEFQTLESAWRGLHYLVTHTETDEKLKLRFLDISKSDLRRTMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGC
LVADYYFDHSAPDVDLLASLGKVAASAHVPFISGASPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRLAEDSRYIG
LAMPRFLARLPYGIRTNPVDEFHFEETTDGADHSKYVWANAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHTFP
TDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDADATANANLSARLPYMFACSRFA
HYLKCIVRDKIGTFKERDDMQRWLNDWIMNYVDADPTNSSLETKSRRPLAAAEVIVEDVEGNPGYYQAKFFLRPHFQLEG
LTVSLRMVAKLPSLKHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-82 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
impC2 YP_006343902.1 type VI secretion protein EvpB VFG2070 Protein 0.0 72
impC2 YP_006343902.1 type VI secretion protein EvpB VFG2475 Protein 1e-90 45
impC2 YP_006343902.1 type VI secretion protein EvpB VFG2093 Protein 9e-89 44