Gene Information

Name : hcp2 (ES15_2817)
Accession : YP_006343901.1
Strain : Cronobacter sakazakii ES15
Genome accession: NC_017933
Putative virulence/resistance : Virulence
Product : type VI secretion system effector, Hcp1 family 2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3033608 - 3034093 bp
Length : 486 bp
Strand : -
Note : COG3157;K11903

DNA sequence :

ATGGCACAGGATATGTTTATTAAAATTGATGGCATCGAAGGGGAGTCATTAGATGCCACTCATAAAAACGAAATTCAGGT
TTTGGCATGGCACTGGAGTGTCTCACAGCACTCCAATATGCACAGCGGTTCTGGTGGTGGTTCCGGTAAGGCGACTGTCG
CTGATTTCTGCTTTGAACATTATGTCGATAAGGCGACACCGAATCTGGTGAGCTACTGTCTGACCGGTAAACATATTAAA
AACATCCAGTTTGTTATTCGTAAAGCGGGCGGAGATCCGCTCGAATATCTGCTGATTAAATTCACGGATGTCATTATTAC
CGGCGTGGATGTAATGGGATCGCTGGAAGATGAAACACGTCCGCGTGAATCAGTGCGCTTCTCATTTACCAAAATGACCG
AAGATTATGTGATGCAGAATGCGGAAGGTCAAAAAGCAGGCGTTATTTCTGCCAGCTATGACGTTAAAGCTAACCTGCAC
GGCTAA

Protein sequence :

MAQDMFIKIDGIEGESLDATHKNEIQVLAWHWSVSQHSNMHSGSGGGSGKATVADFCFEHYVDKATPNLVSYCLTGKHIK
NIQFVIRKAGGDPLEYLLIKFTDVIITGVDVMGSLEDETRPRESVRFSFTKMTEDYVMQNAEGQKAGVISASYDVKANLH
G

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-38	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
hcp2	YP_006343901.1	type VI secretion system effector, Hcp1 family 2	VFG2071	Protein	2e-23	44