|
Name : impC1 (ES15_2197) Accession : YP_006343281.1 Strain : Cronobacter sakazakii ES15 Genome accession: NC_017933 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 2342862 - 2344403 bp Length : 1542 bp Strand : - Note : COG3517;K11900 DNA sequence : ATGCTGATGTCTGTTCAGAACACCCCCACTGCTGCCGGCGCCACGCAGGTGCAGGAAACCACCGGCGGCGTCTACGCCTC GCTGTTTGAAAAAATTAACCTTCACCCGGTCGACGCGCTCGATGATATCGACGCCTGGCAGGACAGCCAGCGCCTGGCGG ACGCCTCCGCCGATGAACGCGTGACCGCCGCGGTCCGGGTTTTCCTGGAGCGCCTGAAACAGTCCGGCCAGCAGGTTGAA AAGCTCGACAAAACGCTGCTTGACCACCATATCGCTGAGCTGGACCGGCAAATCAGCCGCCAGCTGGATACGGTGATGCA CCATCCGGAGTTTCAGCAGGTGGAATCGCTGTGGCGCGGCCTGAAGCATCTGGTGGATCGCACCGATTACCGCCAGAACG TGCGCACGGAAATTCTCGATATCGCCAAAGAGGATTTGCGCCAGGACTTCGAGGACGCGCCGGAAATTATCCAGAGCGGC CTCTACTGGCACACCTACACGGCGGAATATGACACGCCCGGCGGTGAGCCGGTGGGCGCGGTGATTTCCTCGTATGAGTT TGACGCCAGCGCGCAGGATATGGCGCTGCTGCGTAATATCTCTAAAGTCTCCGCCGCGGCGCACATGCCGTTTATCGGTG CCGTCGGCCCGAAATTCTTCCTCAAAGATTCCATGGAAGAGGTGGCGGCGATTAAGGACATCGGCAACTACTTTGACCGC GCCGAATACATCAAGTGGAAATCCTTCCGCGACACCGACGATGCCCGCTATATCGGCCTGACCCTGCCGCGCGTGCTGGG CCGCCTGCCGTACGGCCCGGACACCGTGCCGGTGCGCAGCTTTAACTATGTGGAAGAGGTGAAAGGGCCGGACCACGAAA AATACCTGTGGACCAGCGCGTCGTTTGCCTTCGCGGCCAATATGGTGAAGAGCTTCATTAATAACGGCTGGTGCGTGCAG ATCCGCGGCCCGCAGGCGGGCGGCGCGGTGCAGGACCTGCCGATTCATCTCTATGACCTCGGCACCGGCAATCAGGTGAA AATCCCGTCGGAAGTGATGATCCCGGAGACGCGTGAATTTGAGTTCGCCAGCCTCGGTTTTATCCCGCTCTCCTACTACA AAAACCGCGACTACGCCTGCTTCTTCTCGGCGAACTCGGCGCAGAAACCGGCGCTGTACGACACGCCGGACGCGACGGCC AACAGCCGCATCAACGCGCGCCTGCCGTATATCTTCCTGCTGTCGCGCATCGCGCACTACCTGAAGCTGATTCAGCGCGA GAACATCGGCACCACCAAAGACCGCCGTCTGCTGGAGCTGGAGCTGAACAACTGGGTGCGCGGGCTGGTGACGGAGATGA CTGACCCGGGCGACGAGCTGCAGGCGTCACACCCGCTGCGCGATGCGAAAGTGGTGGTGGAAGATATCGAAGACAACCCG GGCTTTTTCCGCGTCAGGCTGTACGCCGTGCCGCATTTCCAGGTGGAAGGCATGGACGTCAGCCTGTCGCTGGTGTCGCA GATGCCAAAAGCGAAGGCGTGA Protein sequence : MLMSVQNTPTAAGATQVQETTGGVYASLFEKINLHPVDALDDIDAWQDSQRLADASADERVTAAVRVFLERLKQSGQQVE KLDKTLLDHHIAELDRQISRQLDTVMHHPEFQQVESLWRGLKHLVDRTDYRQNVRTEILDIAKEDLRQDFEDAPEIIQSG LYWHTYTAEYDTPGGEPVGAVISSYEFDASAQDMALLRNISKVSAAAHMPFIGAVGPKFFLKDSMEEVAAIKDIGNYFDR AEYIKWKSFRDTDDARYIGLTLPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTSASFAFAANMVKSFINNGWCVQ IRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFASLGFIPLSYYKNRDYACFFSANSAQKPALYDTPDATA NSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDELQASHPLRDAKVVVEDIEDNP GFFRVRLYAVPHFQVEGMDVSLSLVSQMPKAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-102 | 46 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-102 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| impC1 | YP_006343281.1 | type VI secretion protein | VFG2475 | Protein | 1e-112 | 48 |
| impC1 | YP_006343281.1 | type VI secretion protein | VFG2093 | Protein | 4e-110 | 45 |
| impC1 | YP_006343281.1 | type VI secretion protein | VFG2070 | Protein | 4e-87 | 42 |
