Gene Information

Name : MWE_0999 (MWE_0999)
Accession : -
Strain : Helicobacter pylori XZ274
Genome accession: NC_017926
Putative virulence/resistance : Virulence
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 913136 - 915381 bp
Length : 2246 bp
Strand : +
Note : cag pathogenicity island protein (cag5); nonfunctional due to frameshift

DNA sequence : 
ATGGAAGACTTGTTGTATAACACCTTATATTTCATAGAGGATTATAAGTTGGTTGTTATTTTTAGTTCCATAGGGGTAAT
AGCGTTATTTTTTCTCTACAAATTCATAAAAGCTCAAAAAAAAGCTTTTAAAGATAAAGCTAACCAACCTCAAAAGAAAA
AAACTTTAAAGAAATCATTATAGAGGGGCTGAAAGAAAGAGTTAAAACCTTTGGCTTTTGGTTACAAGCTACACTATTAC
TATCCTATTCTTTTATCACATCAGGGTTATTTTTCTTGATCCTATTAGGTAATTTTTATGATGATAATAAATTGCCTGAG
AGTGATGATGATCTTTTTGACATATGGATCTATGCGATACAAGATTTTCCTGCATACTATTTTAAGGCACTTTGTTTTAG
TTCACTCAAGATTTATGGGTTCAATATATCCTTAGTCGTATATAGTTCTATTTTATGCTCTTATATATTCATTACCTTTT
TTGTGTGGTTCTTAAAATACTTAACTCGGACTAGAGACATAGGAGCGAATAAAAAAGTTGATGATCTCTTTGGTAGCGCG
AGTTGGGAGAGCGAAGAAAAAATGATCAAAGCTAAACTTATCACACCCAATAATAAAAAACGCGCCTTTGACAAACGAGA
GGTTATTGTAGGCAGGCGTGGTTTGGGGGATTTTATCGCTTATGCAGGGCAAGCGTTCATTGGCTTGATTGCTCCTACCA
GAAGCGGTAAGGGGGTGGGTTTCATCATGCCCAATATGATCAATTATCCTCAAAATATCGTTGTGTTTGACCCTAAGGCT
GACACTATGGAAACTTGCGGAAAAATCAGAGAAAAACGCTTCAACCAAAAAGTGTTCATCTATGAACCTTTCTCCTTAAA
AACACACCGATTTAATCCTTTCGCTTATGTGGATTTTGGTAATGATGTGGTTTTGACTGAAGACATACTCTCTCAAATTG
ACACACGCCTAAAAGGGCATGGCATGGTGGCTAGTGGGGGGGATTTTTCCACTCAAATCTTTGGATTGGCAAAGCTCGTG
TTCCCTGAAAGACCTAATGAAAAAGATCCTTTTTTTAGCAATCAAGCGCGAAACCTTTTTGTCATCAATTGCAATATTTA
TAGGGATCTCATGTGGACTAAAAAGGGGCTTGAGTTTGTCAAAAGAAAAAAAATCATCATGCCTGAAACTCCCACGATGT
TTTTCATAGGTTCTATGGCAAGCGGTATCAACTTGATTGATGAAGACACAAACATGGAAAAAGTCGTGTCTCTGATGGAA
TTTTTTGGAGGTGAAGAAGATAAGAGTGGCGATAATATAAGAGTGCTTAGTCCTGCCACTAGAAACATGTGGAATAATTT
CAAGACAATGGGCGGTGCTAAAGAAACTTACAGCTCTGTTCAAGGGGTCTATACTTCAGCGTTTGCCCCCTACAACAACG
CCATGATCAGAAATTTCACGAGCGCTAATGATTTTGATTTCAGGCGTTTAAGGATTGATGAAGTGAGTATTGGCGTGATC
GCTAATCCTAAAGAAAGCACTATTGTTGGGCCGATATTAGAGCTGTTTTTCAATGTGATGATTTATAGCAACCTTATTCT
GCCAATCCATGATCCACAATGCAAAAGAAGTTGTTTAATGCTCATGGACGAATTTACGCTTTGTGGCTATTTAGAGACCT
TTGTTAAAGCGGTAGGGATCATGGCAGAATACAACATGCGCCCTGCGTTTGTGTTTCAAAGTAAGGCGCAACTAGAGAAT
GACCCCCCACTTGGTTATGGTAGGAATGGCGCTAAGACTATTTTAGACAACCTTTCTTTGAATATGTATTATGGGATTAA
CAACGATAACTACTATGAACATTTTGAAAAACTTTCTAAGGTGTTAGGGAAATACACTAGACAAGACGTGAGCCGAAGCA
TTGATGATAATACCGGTAAGACCAATACTTCTATCAGCAACAAAGAGCGGTTTTTGATGACCCCTGATGAATTGATGACT
ATGGGCGATGAGCTTATCATTCTAGAAAACACGCTCAAACCCATCAAGTGCCACAAGGCGCTTTACTATGATGATCCATT
CTTCACTGATGAGCTTATTAAGGTAAGTCCAAGCTTGAGCAAGAAATACAAATTAGGGAAAGTGCCTAATCAAGCAACAT
TTTATGACGATTTGCAAGCCGCTAAAACTAGAGGCGAATTGAGCTATGATAAGTCTTTAGTGCCTGTGGGTTCAAGCGAA
CTGTGA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0524 BAD14049.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.8
cag5 YP_005774545.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.7
cag5 YP_005777268.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.7
HP0524 BAD13940.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.7
HP0524 BAD13857.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.6
cag5 YP_005775727.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.6
cag5 YP_005779066.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.5
HP0524 BAD13776.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.5
HP0524 BAD13830.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98.3
HP0524 BAD13803.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 98
HP0524 BAD13967.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 97.1
HP0524 BAD13995.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 97.1
HP0524 BAD14023.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 96.4
cag5 AAR03858.1 Cag5 Virulence cag PAI DNA 0.0 96.3
cag5 AAR03947.1 Cag5 Virulence cag PAI DNA 0.0 96.1
cag5 YP_003728740.1 cag pathogenicity island protein beta Virulence cag PAI DNA 0.0 95.8
cag5 AAR03916.1 Cag5 Virulence cag PAI DNA 0.0 95.7
virD4 NP_223191.1 cag island protein, DNA transfer protein Virulence cag PAI DNA 0.0 95.5
HP0524 BAD13885.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 95.5
cag5 AAR03887.1 Cag5 Virulence cag PAI DNA 0.0 95.5
HP0524 NP_207320.1 cag pathogenicity island protein (cag5) Virulence cag PAI DNA 0.0 95.4
cag-beta AAF80195.1 Cag-beta Virulence cag PAI DNA 0.0 94.7
HP0524 BAD13912.1 cag pathogenicity island protein Virulence cag PAI DNA 0.0 94.2