|
Name : fliP (MWE_0824) Accession : YP_006338349.1 Strain : Helicobacter pylori XZ274 Genome accession: NC_017926 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 736100 - 736882 bp Length : 783 bp Strand : - Note : - DNA sequence : TTGGCTTTGTTTCATCAAAGATTTAAGGCTAGAATTTTGCGTTTTTTCATTTTTTTAATCCTCATTTGCCCTTTAATATG CCCTTTAATGAGCGCTGATAGCGCATTGCCCAGCGTCAATCTCTCTTTAAACGCTCCTAATGATCCTAAACAGCTTGTAA CCACCCTTAATGTCATCGCCCTACTTACGCTGTTAGTTTTAGCCCCGTCATTGATTTTAGTGATGACGAGTTTCACCCGT TTGATCGTGGTGTTTTCTTTTTTAAGGACCGCTTTAGGCACGCAACAAACCCCACCCACTCAAATTTTAGTTTCGCTCTC TTTGATATTGACTTTTTTCATCATGGAACCTAGCCTAAAAAAGGCTTATGATACAGGGATTAAGCCTTATATGGATAAAA AGATTTCTTACACCGAAGCGTTTGAAAAAAGCGCTCTGCCTTTCAAGGAATTCATGCTTAAAAACACACGAGAAAAGGAT CTAGCCCTTTTTTTTAGGATCAGAAACCTCCCTAACCCTAAAACCCCTGATGAGGTGAGTTTGAGCGTTTTAATCCCGGC ATTTATGATAAGCGAGTTGAAAACAGCGTTTCAAATCGGCTTTTTACTCTACTTGCCTTTTTTGGTGATTGATATGGTTA TTAGCTCTATTTTAATGGCGATGGGCATGATGATGCTCCCGCCCGTAATGATTTCTCTGCCTTTTAAAATTTTAGTGTTT ATTCTGGTAGATGGGTTTAATTTATTGACCGAAAATTTAGTAGCGAGTTTTAAAATGGTTTAA Protein sequence : MALFHQRFKARILRFFIFLILICPLICPLMSADSALPSVNLSLNAPNDPKQLVTTLNVIALLTLLVLAPSLILVMTSFTR LIVVFSFLRTALGTQQTPPTQILVSLSLILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKD LALFFRIRNLPNPKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVF ILVDGFNLLTENLVASFKMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-25 | 46 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-25 | 46 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-25 | 46 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 7e-25 | 45 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 7e-25 | 45 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 7e-24 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-22 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 7e-41 | 55 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-40 | 54 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-41 | 54 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 1e-43 | 54 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 5e-26 | 46 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 1e-23 | 41 |
| fliP | YP_006338349.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 1e-22 | 41 |
