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Name : virD2-1 (MWE_0708) Accession : YP_006338262.1 Strain : Helicobacter pylori XZ274 Genome accession: NC_017926 Putative virulence/resistance : Virulence Product : relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 631712 - 633622 bp Length : 1911 bp Strand : + Note : - DNA sequence : ATGGCGTTAGAAAAAAGTTATAGTAAAAACTTTGAAGGCGATGAGCTTTTTGATTATGAGATCATCAAGCCCAAAAAGAC GCTTAAGATACAATACACTTATGCTAAACGCTACTATAAAGAAGTAGAAAAGTTTGCTAAAAATTTAACTCAACTGACAC AAGAAGAATTCATGCGTTTAAGAGAGCCACAAAAACAAGTGGTCATCAAAAACATAGGCAATATGACACGCCTGCATTTA AAAAGGGCGATGGACTATATCGCTAAACATGGTGATCTAGTGAGAGATGAATTTTTCACTGAAGTTAATTATAATGATAT AGCAGAGCAATGGAATGAGCAATTTGAAAAATTATTAGAAAATAAGAGCCGTGTTAAAAATTGCGCTTTACATCTAGTGT TTAGCATTGATGAAAATTGTAATGAAAAAAATTTAAAAGTTTTGGAATTAAGCGTGTATCAAACACTCACTAACACGCTA GGTTATGATTATCCTTTTATAATGAAACTCCATACACACCAAAACAATCCGCATGCGCATGTGATTATCAACAAGACTAA CAGAATTACCAATAAGCAACTACGCTTTAATTCTAAAGACAGCTGTAAAGAGTTTTACCACACACTAAGAGAAACATTTA AAGATTATTTATTTGCTAACTCAAAAGGCGAATTGCAATATTCTAACACGCCTAATATTTATAAGGCGATTAAAGACATA GAAACAGAGTTAGATACGCTAGAAAAACAGGCTAGAAACAATAAGGGTTTTAGGCATGAAAACTATTTCTATAAAGTTTT GGGCAGTGCAACTTCTCAAATAGAAAGCTTGAAAAAAAGAGAAAATGCCCTATCTGATCATTTAGATAGTCTAAAAAGTT TATTAGAAAAAACACATTGGGAAAAAGAAAAATTCACTCCCCCAATAAATGAAAAAGAACTTAACCAACAACTTAAAGAA ATAAAATGGTTAAATAAAGAATCTTTAACCCCTAAAAACACTTATAAAAAAACTCAAAAATTGGTTGTCTGTAAAAACCC TTTAATAAAAGATTATCTTTATACCACCGAAAAACTTTTTGCCACACAGAAAAAGATTATAGATTTAGAGAAAAATTATA AAGATTTAAAAGTCTTGAAGGAAGAATTTAGCAAAGATTTAGAAGCTGATTTATCCCATTCAAAAAAACGCTTTGAGCTT TACACTAGACTAAAAAGCATGAGTAAAGTTTTTATAAGCAAAAGCATTGTTAAAAATTTAGAAAAAATTGCTTTAGATTT TAAAAGCGATAGACATAGTATTTCGCAAAGAGCTTTTGAATTTTTTAGGTATATGAATTATCAAAATTTAAGCTTGACTG ATAAAGGCAATATGTTTTTAGTGGCTAAGTTTTTTAAAGATAGCGCTTTACTTGTTAATATTGCTAGGTTTGAAATGAAA AAGATAGATGATAGTGTTAAAAATTCTAGCCCACAAGGCAATTTATTAGACAAACAAGCTTGGCTCAATCTTTTAGAACA TTTAAAAAGACTTGAAGAGGAAAACTATTGTTTTGCTAAGAAGCGAAAAGAATTCTTAGAAACTAGAGCTATGGAGCTAT CAAAAGATTTAAAATTTTTAACACAGGCTAATGAAAATGATTTGCCCATTTATGAAAGAGGGCAAAGGGATAAAATCATT AAACGCTGTGAAAAATCGCTTAATTTTTTGCAGAAAGAATTACAATGCTTTAAAACCTTATTAAAAAGCGCAAGTATAAC TTTAGAAAACTTGCAAAGCAACCATCAAATCACAGCCGTTACACAAGACATGCAAGAAAACACAAACGCACTCAAAAATA CCACCAAAGATTTTAACAAAACTACCAATGAACCCATAAACCCTAACAATAACTATGAGATGGATTTTTAA Protein sequence : MALEKSYSKNFEGDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHL KRAMDYIAKHGDLVRDEFFTEVNYNDIAEQWNEQFEKLLENKSRVKNCALHLVFSIDENCNEKNLKVLELSVYQTLTNTL GYDYPFIMKLHTHQNNPHAHVIINKTNRITNKQLRFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI ETELDTLEKQARNNKGFRHENYFYKVLGSATSQIESLKKRENALSDHLDSLKSLLEKTHWEKEKFTPPINEKELNQQLKE IKWLNKESLTPKNTYKKTQKLVVCKNPLIKDYLYTTEKLFATQKKIIDLEKNYKDLKVLKEEFSKDLEADLSHSKKRFEL YTRLKSMSKVFISKSIVKNLEKIALDFKSDRHSISQRAFEFFRYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMK KIDDSVKNSSPQGNLLDKQAWLNLLEHLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKII KRCEKSLNFLQKELQCFKTLLKSASITLENLQSNHQITAVTQDMQENTNALKNTTKDFNKTTNEPINPNNNYEMDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD2-1 | YP_002301087.1 | relaxase | Virulence | cag PAI | Protein | 0.0 | 94 |
