Gene Information

Name : clpA (BGIGA_052)
Accession : YP_006337173.1
Strain : Blattabacterium sp. BGIGA
Genome accession: NC_017924
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 63520 - 65622 bp
Length : 2103 bp
Strand : +
Note : -

DNA sequence :
ATGATTTATCATTATTCGTACAGTAAAAAAAAAACTTTCTTCTCATTTGCTTATTCAGATGAAGATATTGAAAATGATAG
TTCTACCTCTTCTTATGGATCTGGAGGAAGTGGAACAGGTTATTATGGAGGAACTTCAATAAGAAGTAAAACTCCTGTTT
TGGATAACTTTGGTAGAGATCTGAATTCCATAGCTATGGAAGGAAAACTAGATCCAGTGGTAGGTAGAGATAAAGAAGTT
GAACGTGTATCTCAAATATTAAGTAGAAGAAAAAAAAATAATCCTCTTCTTATAGGAGAACCTGGAGTAGGAAAATCTGC
TATTGCTGAAGGATTAGCATTGCGTATTGTACAAAAAAAAGTATCTAGAGTATTGTATAATAAGAGAGTAGTAGTATTGG
ATTTAGCAAGTTTAGTAGCTGGAACTAAATATAGAGGACAATTTGAAGAAAGAATGAAAGCAATTATAAATGAATCAGAA
AGAACTACAGGTTTAATCCTCTTTATAGATGAAATTCATACTATGATTGGAGCAGGAGGAACTACAGGTTCATTAGATGC
ATCTAACATATTTAAACCTGCACTAGCAAGAGGATACATTCAATGTATTGGTGCTACCACATTAAATGAATATAGATTAT
ATATAGAAAAAGATGGAGCTTTAGAAAGAAGATTTCAAAAAATTATAGTGCAACCTTCTTCTGAAGAAGAGTCTATAGAA
ATTTTAAAAAAAATAAAAGGTAAATATGAAAGCCATCATAATGTTCTTTATACAGAAGAAGCAATAAAAGCTTGTGTCCA
TCTTACTGTTAGACATATTGTAGATCGTTTTTTACCAGATAAAGCAATTGATGCTTTAGATGAATCTGGATCGCGTGTTC
ACATAAAAAATATAAAAGTTCCACAAGAAATTGTTCTTTTAGAAAAAGAATTAGAAAGTATTCGAAAAGATAAATCTAAA
GTTGTTAAAAGTCAAAAATATGAAGAAGCGGCACGTTTGCGTGACACAGAAAAACGTATAGAACAACAATTAATCAAAGC
TCAAAAAGAGTGGGAAGAGTCTTCTAAAAAGAATAAAGAAATTGTATCTGAAGAAAATGTTGAAGAAGTAGTTTCTATGA
TGAGTGGGGTTCCAGTAAATAAAATAGCTCAAGCTGAAATGAAAAAATTGAGCAAAATGATAGACAGATTGAAAGAAAAA
ATAATAGGACAGAATAAAGCTGTAGAAAAAATAGTAAAATCAGTTCAAAGAAATAGAACTGGATTGAAAGATCCTAATTC
TCCTATAGGTTCTTTTATTTTTTTAGGACAGACAGGAGTAGGAAAAACTTATTTAGCAAAAATTTTTGCAAAAGAACTAT
TTGACTCAGAAGAATCATTAATTCGTATAGATATGAGTGAATATATGGAGAAATTTTCTGTATCTAGATTAATAGGAGCA
CCTCCAGGTTATGTAGGTTACGAAGAAGGAGGACAATTAACAGAGATTATCCGTCGTAGACCTTATTCCGTAATATTATT
AGATGAGATAGAAAAAGCACATCATGAAATATTCAATCTTTTGTTACAAATATTAGATTATGGATGTGTAACAGATAGTA
TTGGAAGAAAAATAAATTTCAAAAATACCGTAATTATTTGTACTTCGAATACAGGAACCCAACAATTAAAAGAGTTTGGT
CAAGGAATAGGGTTTCATACTAAAGCGAGAAAATCTAATAATTATATTAATAATATACTAGAACTAGCTTTGAAACGAAC
TTTTTCTCCTGAATTCTTAAATAGAATAGATGATATTATCATTTTTAATTCTTTAACAAAAGAAGATATATCAAAAATAA
CTTGTATAGAACTAAAAAAAATAATTATTCACATATCAAATTTAGGATATGAATTGGTATTATTCCCTGAAGTAATAGAT
TTTATTCAAAAAATGGGATTTGATCAAAAATATGGAGCACGTCCTTTAAAAAGAGTGATAGAAAAATTTATCAAAAATCC
TATATCGGAATATATAATTAGTGAAAAATTGAAAAAAGGAGATAAAATTTCATTAAAAATGAATTCAAATAGTGACAATG
TAGAAGTATTTATAAACAAATGA

Protein sequence :
MIYHYSYSKKKTFFSFAYSDEDIENDSSTSSYGSGGSGTGYYGGTSIRSKTPVLDNFGRDLNSIAMEGKLDPVVGRDKEV
ERVSQILSRRKKNNPLLIGEPGVGKSAIAEGLALRIVQKKVSRVLYNKRVVVLDLASLVAGTKYRGQFEERMKAIINESE
RTTGLILFIDEIHTMIGAGGTTGSLDASNIFKPALARGYIQCIGATTLNEYRLYIEKDGALERRFQKIIVQPSSEEESIE
ILKKIKGKYESHHNVLYTEEAIKACVHLTVRHIVDRFLPDKAIDALDESGSRVHIKNIKVPQEIVLLEKELESIRKDKSK
VVKSQKYEEAARLRDTEKRIEQQLIKAQKEWEESSKKNKEIVSEENVEEVVSMMSGVPVNKIAQAEMKKLSKMIDRLKEK
IIGQNKAVEKIVKSVQRNRTGLKDPNSPIGSFIFLGQTGVGKTYLAKIFAKELFDSEESLIRIDMSEYMEKFSVSRLIGA
PPGYVGYEEGGQLTEIIRRRPYSVILLDEIEKAHHEIFNLLLQILDYGCVTDSIGRKINFKNTVIICTSNTGTQQLKEFG
QGIGFHTKARKSNNYINNILELALKRTFSPEFLNRIDDIIIFNSLTKEDISKITCIELKKIIIHISNLGYELVLFPEVID
FIQKMGFDQKYGARPLKRVIEKFIKNPISEYIISEKLKKGDKISLKMNSNSDNVEVFINK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-142 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpA YP_006337173.1 ATP-dependent Clp protease, ATP-binding subunit VFG0079 Protein 2e-156 53
clpA YP_006337173.1 ATP-dependent Clp protease, ATP-binding subunit VFG0080 Protein 7e-130 47