Gene Information

Name : MYA_5683 (MYA_5683)
Accession : YP_006336754.1
Strain :
Genome accession: NC_017922
Putative virulence/resistance : Unknown
Product : Transposase, ISPsy4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 709609 - 710616 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGCAAATCCATGTGCTCAAAGCCCAAGGCGTATCGGAGCGCGAGATCGCGCGGCGCCTGGGCATTTCTCGCAACACGGT
GGCGCGGTACCTGTCGGCTGAGGAAGTGCCGCGCTACAAGCCGCGTGAACCGCGGCCAACCAAGCTCGGAGCGTTCGAGG
CGTACATCATCGAGCGCATGAGGGCCGCAGCACCGGAGATCATCGCAGCGCCGGCGCTGCTGCGCGAGTTGCGGGCGCGC
GGCTACGAGGGCCAACTGCGAAGCCTGCAGGCTTTCATGAACACGCATAAGCCCATGCCGAAGCCCGATCCAGTCGTAAG
GTTCGAGACCGAGCCCGGTCGGCAGATGCAGTGCGATTTCGTTGTCTTCCGACGAGGCACCGACCCGCTTTACGCCTTCA
CCGCCACGCTCGGCTTCAGTCGTTGGCGCTGGGCACACTTCACCACCGATGAACGCGCCGAGACGCTGGTTGCCTGTCAT
CATGCGCTGTTCGAAGCCTTGGGTGGCATTCCTCGCGAGATCCTTTACGACAACGCCAAGACCATCGTTGTCGAACGCGA
TGCTTATGGCGACGGCCAACATCGCTGGCACGCCGGCCTGCTCGATCTGGCCAAGCGGTACGGCTTCCTGCCCAGATTGT
GCCAACCGTACCGCGCGCAGACCAAGGGCAAGGTCGAGCGATTCCACCGCTATCTGCGCGGCAATTTCTATGTGCCGCTG
GCAAGCCAGCTTAAACAATCCGGCTTGATGCTCGATGCCGCGACTGCGAACGTCGAGGTGAGTAAATGGCTGCGCGACGT
GGCCAACCAGCGCGTGCATCCGGTTACCGGGCAGGCACCCGCGATTCTGTTGGAGCAACGAGAACGGGCTTGCTTGCTCG
ATATGCCTGGCTACACATTGCCCCGATTGCCGGCTCGCGCCGTCGCTCGGCCGCGCGTTGATCCCGCGATGTCGATCCAG
CACCCGTTGTCCGTCTACCAGCAATTACTGACCGAGGTGCGCGCATGA

Protein sequence :
MQIHVLKAQGVSEREIARRLGISRNTVARYLSAEEVPRYKPREPRPTKLGAFEAYIIERMRAAAPEIIAAPALLRELRAR
GYEGQLRSLQAFMNTHKPMPKPDPVVRFETEPGRQMQCDFVVFRRGTDPLYAFTATLGFSRWRWAHFTTDERAETLVACH
HALFEALGGIPREILYDNAKTIVVERDAYGDGQHRWHAGLLDLAKRYGFLPRLCQPYRAQTKGKVERFHRYLRGNFYVPL
ASQLKQSGLMLDAATANVEVSKWLRDVANQRVHPVTGQAPAILLEQRERACLLDMPGYTLPRLPARAVARPRVDPAMSIQ
HPLSVYQQLLTEVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-56 45
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 1e-55 45
unnamed CAA21403.1 - Not tested HPI Protein 1e-55 45
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 1e-55 45
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 9e-56 45
api83 CAF28557.1 transposase Not tested YAPI Protein 9e-56 45
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 6e-56 45
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 6e-56 45
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 1e-55 45
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 6e-56 45
y2411 NP_669718.1 transposase Not tested HPI Protein 1e-55 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_5683 YP_006336754.1 Transposase, ISPsy4 VFG1607 Protein 4e-56 45
MYA_5683 YP_006336754.1 Transposase, ISPsy4 VFG1461 Protein 6e-56 45
MYA_5683 YP_006336754.1 Transposase, ISPsy4 VFG1514 Protein 4e-56 45
MYA_5683 YP_006336754.1 Transposase, ISPsy4 VFG1626 Protein 4e-56 45