Gene Information

Name : MYA_5641 (MYA_5641)
Accession : YP_006336713.1
Strain :
Genome accession: NC_017922
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 662251 - 662913 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence :
ATGCGGGTATTGCTCGTGGAGGACGACAAGCTGATCGGCAGCGGCGTGGAGGACGGGCTGAGCGAGGCCGGCATGACGGT
CGACTGGGCGCACGACGGCCGGCATGCGCAACTGGCGCTCGAAACCACGCCGTACGACCTCGTCGTGCTGGATCTGGGCT
TGCCGCGCATGTCCGGCGTCGAGCTGCTCGCGTGGCTTCGCAAGCGTCGCGACCATACGCCGGTGCTGGTGATGACCGCT
CGCGACACGGTGGCCGATCGCGTGAGCGGCCTGAGCGCGGGCGCCGACGATTATCTCGGCAAGCCGTTCGACCTGACCGA
GCTGGTCGCGCGCTGCCGTGCGCTCGTGCGGCGTTCGCAGGGGCGCAGCACCGACACGATCGAATACGGCGACCTGTCGG
TCGATCCCGCCTTGATGACGGCCACCCGCGGCGCCGAGCGAATCGCGCTGACGTCGCGCGAATGCGCGTTGCTGGTCGAA
CTGCTGTCGAATCAGGGCCGCCCGCTGTCGCGCGCGCAGCTGCAGGACAGCCTGTACGGCTGGAACGAGGAGATCGAGAG
CAATGCGATCGAGGTGCACGTGTCGAACCTGCGCAAGAAGCTCGGCGCCGACCTGATCCGCACGATCCGCGGCGTGGGCT
ACGTGGTGGAGAAGGCGTCGTGA

Protein sequence :
MRVLLVEDDKLIGSGVEDGLSEAGMTVDWAHDGRHAQLALETTPYDLVVLDLGLPRMSGVELLAWLRKRRDHTPVLVMTA
RDTVADRVSGLSAGADDYLGKPFDLTELVARCRALVRRSQGRSTDTIEYGDLSVDPALMTATRGAERIALTSRECALLVE
LLSNQGRPLSRAQLQDSLYGWNEEIESNAIEVHVSNLRKKLGADLIRTIRGVGYVVEKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-40 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0487 Protein 2e-39 46
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0347 Protein 1e-31 43
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0197 Protein 8e-34 43
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0111 Protein 1e-32 42
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0083 Protein 4e-31 42
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family BAC0308 Protein 5e-33 42
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family VFG1390 Protein 4e-34 43
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family VFG0473 Protein 4e-40 43
MYA_5641 YP_006336713.1 Two component transcriptional regulator, winged helix family VFG1389 Protein 2e-26 41