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Name : MYA_4965 (MYA_4965) Accession : YP_006336044.1 Strain : Genome accession: NC_017921 Putative virulence/resistance : Virulence Product : type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) Function : - COG functional category : - COG ID : - EC number : - Position : 2238990 - 2241236 bp Length : 2247 bp Strand : - Note : - DNA sequence : ATGACGGCCCGCGCCGCGCGGCGACAACGACAGGACGACGGCACGATGGCAGAACCCAAGGCGCTTCCCCGCGACTGGCA GCGGATTTTTTCCGCCGGCCGGGGCGTGTCCGGGCAGCGTCTCGGCGCGTCGCCGCGCGCCGATCTGTTTCTCGCCGCGT TCATCGTGTCGGTGGTCGCGCTGTTCATCCTGCCGCTGCCGCAGGCCGCGCTCGACGGGATGATCTCGCTGAACCTCGCC GCCAGCGTCGTGCTGCTGACCGTGTCCACCTATGTGCCGTCCGCCGTCAGTTTTTCGGCGTTTCCAGCGCTGCTGCTGTT CACGACGCTGTTCCGGCTCGCGCTGAACATCGCGTCGTGCAAGCTGATCCTGCTGCATGCGAACGCCGGCCACGTGATCG ACGCGTTCGGGCGGCTGGTGGTCGGCAACAACGTCGTGGTCGGCGGCGTGGTGTTCCTCGTGATCGCGGTCGTGCAGTTC ATCGTGATCGCGAAGGGCTCAGAACGCGTGGCCGAAGTCGGCGCGCGCTTCTCGCTCGACGCGATGCCGGGCAAGCAGAT GAGCATCGACGCCGACCTGCGCGCCGGCATCATCAGCGCCGACGAAGCGCGCGAACGCCGCGAGAAGCTCGAGCAGGAAT CGCAGATGCACGGCGCGATGGACGGCGCGATGAAGTTCGTCAAGGGCGACGCGATCGCGGGCCTCGTGATCGCGTTCATC AACATCGTCGCGGGGATCGCTGTCGGCACGCTGATGCACGGGATGGACATCGGCGAGGCGCTGCAACGCTACGCGATCCT GACGGTCGGCGACGGCATGGCGTCGCAGATTCCGTCGCTGCTCGTGTCGATCGCGGCCGGCATCGTGACGACGCGCGTCG CGACGCGCGATGCGCGGCAGCGCCAGCTCGGCGAACAGCTGGGCGAGCAGCTCGGCGCACATCCGCGCGCGCTCCTCATC GCGGCGCTGGTGCTGGCCGGCTTCCTGGTCGTGCCCGGCTTCCCGAAATGGTCGTTCGCGCTCATCGCGCTCGGCCTCGG CGCGTTCGCGGTGGCGCAGCTGAAGCGCAAGACGACGGCGCCGAGCTTCAACCTGATCCACGTCGCCGGCCGCATCGGCG CGGCCGACGACGGGCAGCCGGCGAAGGTGTCGCACGCGGCGGGCGTCACGTCGCTGATCGCGGTGTCGCTGTCGGACGAT CTGCGCGCGGCGCTGAACCTCGCGCAGCTGCAGACGGCGCTGTCGAGCGCGAAGGCGCGCGTCGATGCGGACATCGGCAC GGTGTTTCCGCGCATCACGTTGAACGACGACGAAGGCGCACCGGCGTCGAGCTACCGGATCTACCTGCAGGACGTGCTGG TCGCGCACGGCGCGCTGAAGCCGGGCTGGCTGCTGTGGGACGGCGTCGCGCCGCTGCCGGAGCGCGCGGAACGCCAGCCG GCCGAGGCGTTCGGCCCGTTCGCGACCGCGCTGTGGATCAAGCCCGACGGCGCGGCGCCGGACGGCAAGTGGCTGACGAG CGAAGCGGCGCTCGCCGCGCACGTCGAGCAGATCGTGCGCCAGCACGCGGACGAACTGCTCGGCATCCAGGAGACGCAGG CGCTCGTGCATCTGGTGCGCCGCGATCATCCGGAGCTGGTCGGCGAGCTGACGCGGCTCGTGCCGCTGCAGCGCATCACC GAGGTGTTGCGCCGGCTGCTCGCCGAACAGGTGCCGATCCGCAACCTGCGCGTGATTTTCGAAAGCCTCATCACGTGGGC GCCGAACGAGCCCGACGACGTGATCGCGCTGGTCGAGCTGGTGCGCGTCGACCTGCGCCGGATGATCACCGACCGTCATG CGGGCGCAACGCGGCAACTGCGCGTCGTGCTGTTCGAGCAGAACCTGCAGGAGCGCATCGAGAACGCGGTGATGCGCACC AAGCAGGGCAATTTCCTCGCGCTGTCGAGCGCGGTCAAGCAGGACATCGGCGAACAGGTGCGCGCGATCGCCAACACCGC ACAGGCCGCACCGGCCGCGCACGGCGCCGCCGCCGGCACGCCGAGGCTCGCGGTGATGGTCGCGCTCGGCGCCCGCCGCT ACGTCAAGACGATCCTGCAGCCGGTGCTGCCCGACCTGCCCGTGCTGTCGTATCAGGAGATCGAGGAGGACGTGCAGCTG CACACGGTCGGCTGGGTGAAGAACCCGCCCGACGACGGCACGGTCGGCGCGGGCGCCGGCGTGCGCGCACCGGGAGCCGT GCAATGA Protein sequence : MTARAARRQRQDDGTMAEPKALPRDWQRIFSAGRGVSGQRLGASPRADLFLAAFIVSVVALFILPLPQAALDGMISLNLA ASVVLLTVSTYVPSAVSFSAFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQF IVIAKGSERVAEVGARFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFI NIVAGIAVGTLMHGMDIGEALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLI AALVLAGFLVVPGFPKWSFALIALGLGAFAVAQLKRKTTAPSFNLIHVAGRIGAADDGQPAKVSHAAGVTSLIAVSLSDD LRAALNLAQLQTALSSAKARVDADIGTVFPRITLNDDEGAPASSYRIYLQDVLVAHGALKPGWLLWDGVAPLPERAERQP AEAFGPFATALWIKPDGAAPDGKWLTSEAALAAHVEQIVRQHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRIT EVLRRLLAEQVPIRNLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGATRQLRVVLFEQNLQERIENAVMRT KQGNFLALSSAVKQDIGEQVRAIANTAQAAPAAHGAAAGTPRLAVMVALGARRYVKTILQPVLPDLPVLSYQEIEEDVQL HTVGWVKNPPDDGTVGAGAGVRAPGAVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 4e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MYA_4965 | YP_006336044.1 | type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) | VFG0064 | Protein | 3e-87 | 41 |
