Gene Information

Name : MYA_4964 (MYA_4964)
Accession : YP_006336043.1
Strain :
Genome accession: NC_017921
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2238715 - 2238993 bp
Length : 279 bp
Strand : -
Note : -

DNA sequence :
ATGACCAGCTCGACGATTCTCGACCTGACGCGTCAGGCGCTGATGCTGGTGCTGCTGCTGTCGCTGCCGATCGTCGCGAT
CGCCACCGTCACGGGCCTCGTCGTCGCGATCCTGCAGGCCGTCACGCAGGTGCAGGACGCCAACATCGGCATCGCGGTGC
GGCTGATCGCCGTGATGGTCGCGCTGGTGCTGCTGTCCGGCTGGCTCGGCAGCGAAGTGCTGCGCTTCGCGCAGCAGGCG
CTGGAACGCATGTTCGTTTCTTCCACAGGAGTGCTTTGA

Protein sequence :
MTSSTILDLTRQALMLVLLLSLPIVAIATVTGLVVAILQAVTQVQDANIGIAVRLIAVMVALVLLSGWLGSEVLRFAQQA
LERMFVSSTGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 3e-07 48
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 2e-05 44
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 2e-05 44
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 2e-05 44
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 9e-06 43
lscS AAO18039.1 LscS Virulence TTSS locus Protein 7e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_4964 YP_006336043.1 type III secretion inner membrane protein VFG0187 Protein 5e-06 49
MYA_4964 YP_006336043.1 type III secretion inner membrane protein VFG1013 Protein 2e-10 45
MYA_4964 YP_006336043.1 type III secretion inner membrane protein VFG0395 Protein 2e-08 42