Gene Information

Name : MYA_4711 (MYA_4711)
Accession : YP_006335795.1
Strain :
Genome accession: NC_017921
Putative virulence/resistance : Unknown
Product : ISPsy4, transposition helper protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1947637 - 1948410 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence :
ATGAACTTGCAGCAGGAACGCATCGACGGGCACTGCCAAAGCCTGAAGCTCGAGGGACTCATGCACCGATACGTCGCTCT
GGCCAGCGACGCGGCGGCCAAGCAATGGAGTTTCCTCGACTTCCTCGAGAACGCGCTCGCGCACGAACGAGAGACGAGGC
AAGTTCGTTCGCGGCAAACACTGGTGCGCATGGCCGGGTTTCCCGCCATCAAGACACTGGATGACTACGACTACAGCTTC
GCCGTCGGGGTCCCGCGCGAGGCAATCGACGAGCTTGCCACGCTACGCTTCATCGAGCGAGGCGAGAACGCCGTGTTGCT
TGGTCCGTCGGGCGTGGGCAAGACGCACCTCGCGATCGCCATCGGATATGCAGCGACGCAGGCCGGCATCAAGACGAAGT
TCATCACGGCGGCGGATCTGATGTTACAGCTCGAGGCTGCACGCCGACAGGAGCGATACGACGCCGTTCTTCGGCACAAC
ATTCTCGGCCCGAGGCTGCTCATCGTCGATGAGATCGGCTATCTACCGCTCTCGGGCGATCAGGCCAGTCACTTCTTCCA
GATCGTCGCCAAGCGCTACGAGCGTGGCTCGATGATCCTGACCAGCAACCTGCCGTTTGCGCAGTGGGACGAAACCTTCG
GCGGCAACACCACCCTCACTGCAGCGATGCTCGACCGCATCCTCCACCATGCCCACATCATCCAGATCAAAGGAGACAGC
TACAGACTGAAACAGCAACGCAAAGCCGGGCACGTCCCGACATCGAAGAAGTAA

Protein sequence :
MNLQQERIDGHCQSLKLEGLMHRYVALASDAAAKQWSFLDFLENALAHERETRQVRSRQTLVRMAGFPAIKTLDDYDYSF
AVGVPREAIDELATLRFIERGENAVLLGPSGVGKTHLAIAIGYAATQAGIKTKFITAADLMLQLEAARRQERYDAVLRHN
ILGPRLLIVDEIGYLPLSGDQASHFFQIVAKRYERGSMILTSNLPFAQWDETFGGNTTLTAAMLDRILHHAHIIQIKGDS
YRLKQQRKAGHVPTSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-63 62
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-79 56
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-79 56
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-79 56
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-79 56
unnamed CAA21402.1 - Not tested HPI Protein 3e-79 56
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-79 56
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-79 56
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-79 56
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-79 56
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-79 56
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-79 56
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-79 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_4711 YP_006335795.1 ISPsy4, transposition helper protein VFG1460 Protein 1e-63 62
MYA_4711 YP_006335795.1 ISPsy4, transposition helper protein VFG1515 Protein 1e-79 56
MYA_4711 YP_006335795.1 ISPsy4, transposition helper protein VFG1627 Protein 1e-79 56
MYA_4711 YP_006335795.1 ISPsy4, transposition helper protein VFG1606 Protein 1e-79 56
MYA_4711 YP_006335795.1 ISPsy4, transposition helper protein VFG1663 Protein 3e-79 56