Gene Information

Name : MYA_4374 (MYA_4374)
Accession : YP_006335460.1
Strain :
Genome accession: NC_017921
Putative virulence/resistance : Virulence
Product : two component heavy metal response Transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1572635 - 1573330 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGTCCTGATCGTCGAAGACGAACCGAAGGTCGTCGAATACCTGAAGAGCGGCCTGACCGAGGAAGGCTGGGTCGT
CGACACCGCGCTCGACGGCGAAGACGGCGCGTGGAAGGCCGTCGAGTTCGACTACGACGTGGTCGTGCTCGACGTGATGC
TGCCGAAGCTCGACGGCTTCGGCGTGCTGCGCGCGTTGCGCGGGCAGAAGCAGACGCCCGTGATCATGCTGACCGCCCGC
GACCGCGTCGACGATCGCGTGCGCGGGCTGCGCGGCGGCGCCGACGACTATCTGACCAAGCCGTTCTCGTTCCTCGAGCT
GATCGAACGGCTGCGCGCGCTCACGCGCCGCGCGCGCGTGCAGGAATCGACGCTGATCTCGATCGGCGATCTGCGCGTCG
ACCTGATCGGCCGCCGCGCGACGCGCGACGGCACGCGCCTGGACCTGACCGCCCAGGAATTCCAGCTGCTCGGCGTGCTC
GCGCGGCGCAGCGGCGACGTGCTGTCGAAGACGACCATCGCCGAGCTGGTGTGGGACGTGAACTTCGACAGCAACGCGAA
CGTCGTCGAGACGGCGATCAAGCGGCTGCGCGCGAAGCTCGACGGCCCGTTCGCGGACAAGCTGCTGCATACGATCCGCG
GCATGGGCTACGTGCTCGAGGCGCGCGACGACGGCGACAGCGAGAGGCACGCATGA

Protein sequence :
MKVLIVEDEPKVVEYLKSGLTEEGWVVDTALDGEDGAWKAVEFDYDVVVLDVMLPKLDGFGVLRALRGQKQTPVIMLTAR
DRVDDRVRGLRGGADDYLTKPFSFLELIERLRALTRRARVQESTLISIGDLRVDLIGRRATRDGTRLDLTAQEFQLLGVL
ARRSGDVLSKTTIAELVWDVNFDSNANVVETAIKRLRAKLDGPFADKLLHTIRGMGYVLEARDDGDSERHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-41 51
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-40 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0083 Protein 5e-48 58
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0125 Protein 1e-52 57
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0197 Protein 2e-47 54
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0638 Protein 5e-39 54
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0111 Protein 3e-45 50
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0308 Protein 2e-45 50
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family BAC0347 Protein 1e-40 48
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family CP001918.1.gene5135. Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family VFG0596 Protein 2e-41 51
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family VFG1389 Protein 6e-31 47
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family VFG1386 Protein 3e-26 42
MYA_4374 YP_006335460.1 two component heavy metal response Transcriptional regulator, winged helix family VFG1390 Protein 5e-28 41